Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GABREP78334 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.01■□□□□ 0.95
GABREP78334 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21■□□□□ 0.95
GABREP78334 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
GABREP78334 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21■□□□□ 0.95
GABREP78334 CROCCP5-201ENST00000436658 830 ntBASIC21■□□□□ 0.95
GABREP78334 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21■□□□□ 0.95
GABREP78334 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
GABREP78334 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
GABREP78334 AC142381.3-201ENST00000568208 1670 ntBASIC20.99■□□□□ 0.95
GABREP78334 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.99■□□□□ 0.95
GABREP78334 BX005040.4-201ENST00000637145 1518 ntBASIC20.99■□□□□ 0.95
GABREP78334 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
GABREP78334 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GABREP78334 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
GABREP78334 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.99■□□□□ 0.95
GABREP78334 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.99■□□□□ 0.95
GABREP78334 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
GABREP78334 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.99■□□□□ 0.95
GABREP78334 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
GABREP78334 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GABREP78334 AC022211.4-201ENST00000625094 2161 ntBASIC20.99■□□□□ 0.95
GABREP78334 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GABREP78334 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.98■□□□□ 0.95
GABREP78334 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
GABREP78334 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
GABREP78334 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.98■□□□□ 0.95
GABREP78334 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GABREP78334 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GABREP78334 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
GABREP78334 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
GABREP78334 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
GABREP78334 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
GABREP78334 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
GABREP78334 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GABREP78334 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GABREP78334 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
GABREP78334 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GABREP78334 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
GABREP78334 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.97■□□□□ 0.95
GABREP78334 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GABREP78334 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
GABREP78334 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GABREP78334 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GABREP78334 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
GABREP78334 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.96■□□□□ 0.95
GABREP78334 MIR663A-201ENST00000385250 93 ntBASIC20.96■□□□□ 0.95
GABREP78334 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
GABREP78334 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.96■□□□□ 0.95
GABREP78334 AP003733.4-201ENST00000623785 1697 ntBASIC20.96■□□□□ 0.95
GABREP78334 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GABREP78334 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
GABREP78334 NCF1B-203ENST00000435988 1254 ntBASIC20.95■□□□□ 0.94
GABREP78334 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
GABREP78334 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.95■□□□□ 0.94
GABREP78334 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.95■□□□□ 0.94
GABREP78334 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.95■□□□□ 0.94
GABREP78334 AC011767.1-201ENST00000617410 1153 ntBASIC20.95■□□□□ 0.94
GABREP78334 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
GABREP78334 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
GABREP78334 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.94■□□□□ 0.94
GABREP78334 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.94■□□□□ 0.94
GABREP78334 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
GABREP78334 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
GABREP78334 KRT18P11-201ENST00000435214 1283 ntBASIC20.94■□□□□ 0.94
GABREP78334 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.94■□□□□ 0.94
GABREP78334 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.94■□□□□ 0.94
GABREP78334 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.94■□□□□ 0.94
GABREP78334 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.94■□□□□ 0.94
GABREP78334 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
GABREP78334 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
GABREP78334 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.93■□□□□ 0.94
GABREP78334 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
GABREP78334 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.93■□□□□ 0.94
GABREP78334 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.93■□□□□ 0.94
GABREP78334 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.93■□□□□ 0.94
GABREP78334 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
GABREP78334 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.93■□□□□ 0.94
GABREP78334 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
GABREP78334 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
GABREP78334 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.93■□□□□ 0.94
GABREP78334 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GABREP78334 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GABREP78334 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
GABREP78334 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
GABREP78334 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.92■□□□□ 0.94
GABREP78334 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.92■□□□□ 0.94
GABREP78334 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.92■□□□□ 0.94
GABREP78334 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GABREP78334 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GABREP78334 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
GABREP78334 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
GABREP78334 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
GABREP78334 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
GABREP78334 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
GABREP78334 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
GABREP78334 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
GABREP78334 GPX1P1-201ENST00000388829 606 ntBASIC20.91■□□□□ 0.94
GABREP78334 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.91■□□□□ 0.94
GABREP78334 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms