Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
HIST1H3AP68431 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
HIST1H3AP68431 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
HIST1H3AP68431 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
HIST1H3AP68431 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.22■□□□□ 0.67
HIST1H3AP68431 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HIST1H3AP68431 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HIST1H3AP68431 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HIST1H3AP68431 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
HIST1H3AP68431 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.22■□□□□ 0.67
HIST1H3AP68431 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.22■□□□□ 0.67
HIST1H3AP68431 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HIST1H3AP68431 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HIST1H3AP68431 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
HIST1H3AP68431 pRNA.6-201ENST00000610482 90 ntBASIC19.22■□□□□ 0.67
HIST1H3AP68431 pRNA.5-201ENST00000612139 90 ntBASIC19.22■□□□□ 0.67
HIST1H3AP68431 pRNA.11-201ENST00000618423 90 ntBASIC19.22■□□□□ 0.67
HIST1H3AP68431 pRNA.13-201ENST00000619112 90 ntBASIC19.22■□□□□ 0.67
HIST1H3AP68431 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.22■□□□□ 0.67
HIST1H3AP68431 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.22■□□□□ 0.67
HIST1H3AP68431 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
HIST1H3AP68431 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HIST1H3AP68431 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HIST1H3AP68431 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
HIST1H3AP68431 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HIST1H3AP68431 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.21■□□□□ 0.67
HIST1H3AP68431 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HIST1H3AP68431 AC133637.1-201ENST00000624115 1537 ntBASIC19.21■□□□□ 0.67
HIST1H3AP68431 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
HIST1H3AP68431 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
HIST1H3AP68431 AC139530.1-201ENST00000575312 1977 ntBASIC19.21■□□□□ 0.67
HIST1H3AP68431 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.21■□□□□ 0.67
HIST1H3AP68431 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HIST1H3AP68431 MIR3181-201ENST00000578512 73 ntBASIC19.21■□□□□ 0.67
HIST1H3AP68431 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
HIST1H3AP68431 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.21■□□□□ 0.67
HIST1H3AP68431 MIR4466-201ENST00000606121 54 ntBASIC19.21■□□□□ 0.67
HIST1H3AP68431 CA15P2-201ENST00000611168 834 ntBASIC19.21■□□□□ 0.67
HIST1H3AP68431 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.21■□□□□ 0.67
HIST1H3AP68431 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HIST1H3AP68431 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HIST1H3AP68431 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HIST1H3AP68431 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
HIST1H3AP68431 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HIST1H3AP68431 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HIST1H3AP68431 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HIST1H3AP68431 EP400NL-214ENST00000641289 2402 ntBASIC19.2■□□□□ 0.66
HIST1H3AP68431 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HIST1H3AP68431 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HIST1H3AP68431 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.2■□□□□ 0.66
HIST1H3AP68431 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.2■□□□□ 0.66
HIST1H3AP68431 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.2■□□□□ 0.66
HIST1H3AP68431 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.2■□□□□ 0.66
HIST1H3AP68431 AC092171.4-201ENST00000609130 632 ntBASIC19.2■□□□□ 0.66
HIST1H3AP68431 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
HIST1H3AP68431 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.2■□□□□ 0.66
HIST1H3AP68431 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HIST1H3AP68431 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HIST1H3AP68431 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HIST1H3AP68431 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.2■□□□□ 0.66
HIST1H3AP68431 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HIST1H3AP68431 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.19■□□□□ 0.66
HIST1H3AP68431 AC080038.3-201ENST00000623346 1952 ntBASIC19.19■□□□□ 0.66
HIST1H3AP68431 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
HIST1H3AP68431 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
HIST1H3AP68431 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HIST1H3AP68431 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
HIST1H3AP68431 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.19■□□□□ 0.66
HIST1H3AP68431 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HIST1H3AP68431 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
HIST1H3AP68431 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HIST1H3AP68431 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HIST1H3AP68431 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HIST1H3AP68431 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HIST1H3AP68431 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HIST1H3AP68431 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HIST1H3AP68431 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.19■□□□□ 0.66
HIST1H3AP68431 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HIST1H3AP68431 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HIST1H3AP68431 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
HIST1H3AP68431 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
HIST1H3AP68431 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
HIST1H3AP68431 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.18■□□□□ 0.66
HIST1H3AP68431 AC131281.2-201ENST00000520478 145 ntBASIC19.18■□□□□ 0.66
HIST1H3AP68431 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.18■□□□□ 0.66
HIST1H3AP68431 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HIST1H3AP68431 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.18■□□□□ 0.66
HIST1H3AP68431 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HIST1H3AP68431 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
HIST1H3AP68431 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.17■□□□□ 0.66
HIST1H3AP68431 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HIST1H3AP68431 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.17■□□□□ 0.66
HIST1H3AP68431 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HIST1H3AP68431 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.17■□□□□ 0.66
HIST1H3AP68431 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HIST1H3AP68431 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.17■□□□□ 0.66
HIST1H3AP68431 AL031602.1-201ENST00000633169 911 ntBASIC19.17■□□□□ 0.66
HIST1H3AP68431 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HIST1H3AP68431 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
HIST1H3AP68431 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms