Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.23■□□□□ 0.83
SMIM11AP58511 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMIM11AP58511 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.23■□□□□ 0.83
SMIM11AP58511 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
SMIM11AP58511 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
SMIM11AP58511 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SMIM11AP58511 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMIM11AP58511 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.22■□□□□ 0.83
SMIM11AP58511 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMIM11AP58511 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMIM11AP58511 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMIM11AP58511 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMIM11AP58511 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMIM11AP58511 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMIM11AP58511 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMIM11AP58511 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMIM11AP58511 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMIM11AP58511 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SMIM11AP58511 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SMIM11AP58511 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
SMIM11AP58511 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
SMIM11AP58511 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
SMIM11AP58511 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMIM11AP58511 AC007375.3-201ENST00000600936 2314 ntBASIC20.21■□□□□ 0.83
SMIM11AP58511 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
SMIM11AP58511 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMIM11AP58511 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMIM11AP58511 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMIM11AP58511 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMIM11AP58511 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.21■□□□□ 0.83
SMIM11AP58511 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SMIM11AP58511 DUX4L4-201ENST00000566884 1269 ntBASIC20.21■□□□□ 0.83
SMIM11AP58511 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.21■□□□□ 0.83
SMIM11AP58511 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.21■□□□□ 0.83
SMIM11AP58511 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
SMIM11AP58511 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.21■□□□□ 0.83
SMIM11AP58511 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
SMIM11AP58511 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMIM11AP58511 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMIM11AP58511 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
SMIM11AP58511 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMIM11AP58511 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
SMIM11AP58511 LINC01960-201ENST00000563759 1884 ntBASIC20.2■□□□□ 0.82
SMIM11AP58511 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SMIM11AP58511 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.2■□□□□ 0.82
SMIM11AP58511 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SMIM11AP58511 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
SMIM11AP58511 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
SMIM11AP58511 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
SMIM11AP58511 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
SMIM11AP58511 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMIM11AP58511 FBXW4P1-201ENST00000426721 2239 ntBASIC20.19■□□□□ 0.82
SMIM11AP58511 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.19■□□□□ 0.82
SMIM11AP58511 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.19■□□□□ 0.82
SMIM11AP58511 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMIM11AP58511 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMIM11AP58511 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMIM11AP58511 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SMIM11AP58511 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMIM11AP58511 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMIM11AP58511 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.19■□□□□ 0.82
SMIM11AP58511 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SMIM11AP58511 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.19■□□□□ 0.82
SMIM11AP58511 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.19■□□□□ 0.82
SMIM11AP58511 AC103834.1-201ENST00000520383 144 ntBASIC20.19■□□□□ 0.82
SMIM11AP58511 AC103724.3-201ENST00000564481 992 ntBASIC20.19■□□□□ 0.82
SMIM11AP58511 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.19■□□□□ 0.82
SMIM11AP58511 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
SMIM11AP58511 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
SMIM11AP58511 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SMIM11AP58511 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SMIM11AP58511 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMIM11AP58511 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SMIM11AP58511 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
SMIM11AP58511 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.18■□□□□ 0.82
SMIM11AP58511 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SMIM11AP58511 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.18■□□□□ 0.82
SMIM11AP58511 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SMIM11AP58511 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SMIM11AP58511 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SMIM11AP58511 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.18■□□□□ 0.82
SMIM11AP58511 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
SMIM11AP58511 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMIM11AP58511 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SMIM11AP58511 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.18■□□□□ 0.82
SMIM11AP58511 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SMIM11AP58511 AC012354.3-201ENST00000623734 483 ntBASIC20.18■□□□□ 0.82
SMIM11AP58511 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SMIM11AP58511 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SMIM11AP58511 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMIM11AP58511 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMIM11AP58511 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
SMIM11AP58511 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.18■□□□□ 0.82
SMIM11AP58511 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMIM11AP58511 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
SMIM11AP58511 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
SMIM11AP58511 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SMIM11AP58511 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SMIM11AP58511 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SMIM11AP58511 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms