Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLDN18P56856 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.71■□□□□ 0.75
CLDN18P56856 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLDN18P56856 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLDN18P56856 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLDN18P56856 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLDN18P56856 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.7■□□□□ 0.74
CLDN18P56856 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.7■□□□□ 0.74
CLDN18P56856 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.7■□□□□ 0.74
CLDN18P56856 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
CLDN18P56856 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLDN18P56856 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CLDN18P56856 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLDN18P56856 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLDN18P56856 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.69■□□□□ 0.74
CLDN18P56856 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CLDN18P56856 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLDN18P56856 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.69■□□□□ 0.74
CLDN18P56856 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLDN18P56856 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLDN18P56856 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.69■□□□□ 0.74
CLDN18P56856 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.69■□□□□ 0.74
CLDN18P56856 AL358852.1-201ENST00000623174 1268 ntBASIC19.69■□□□□ 0.74
CLDN18P56856 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLDN18P56856 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CLDN18P56856 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.69■□□□□ 0.74
CLDN18P56856 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLDN18P56856 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.69■□□□□ 0.74
CLDN18P56856 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN18P56856 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN18P56856 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.68■□□□□ 0.74
CLDN18P56856 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.68■□□□□ 0.74
CLDN18P56856 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.68■□□□□ 0.74
CLDN18P56856 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.68■□□□□ 0.74
CLDN18P56856 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CLDN18P56856 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.68■□□□□ 0.74
CLDN18P56856 MIR6821-201ENST00000617625 74 ntBASIC19.68■□□□□ 0.74
CLDN18P56856 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.68■□□□□ 0.74
CLDN18P56856 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.68■□□□□ 0.74
CLDN18P56856 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN18P56856 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN18P56856 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CLDN18P56856 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.68■□□□□ 0.74
CLDN18P56856 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN18P56856 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.67■□□□□ 0.74
CLDN18P56856 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN18P56856 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN18P56856 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
CLDN18P56856 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN18P56856 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN18P56856 AC097381.1-201ENST00000429019 1296 ntBASIC19.67■□□□□ 0.74
CLDN18P56856 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN18P56856 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.67■□□□□ 0.74
CLDN18P56856 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.67■□□□□ 0.74
CLDN18P56856 AC012414.1-201ENST00000556676 535 ntBASIC19.67■□□□□ 0.74
CLDN18P56856 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.67■□□□□ 0.74
CLDN18P56856 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.67■□□□□ 0.74
CLDN18P56856 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.67■□□□□ 0.74
CLDN18P56856 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.67■□□□□ 0.74
CLDN18P56856 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN18P56856 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.67■□□□□ 0.74
CLDN18P56856 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN18P56856 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN18P56856 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN18P56856 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.66■□□□□ 0.74
CLDN18P56856 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
CLDN18P56856 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN18P56856 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN18P56856 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.66■□□□□ 0.74
CLDN18P56856 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.66■□□□□ 0.74
CLDN18P56856 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.66■□□□□ 0.74
CLDN18P56856 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN18P56856 AL354811.1-201ENST00000610286 706 ntBASIC19.66■□□□□ 0.74
CLDN18P56856 AC087239.1-201ENST00000622671 572 ntBASIC19.66■□□□□ 0.74
CLDN18P56856 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CLDN18P56856 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CLDN18P56856 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN18P56856 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.65■□□□□ 0.74
CLDN18P56856 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.65■□□□□ 0.74
CLDN18P56856 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN18P56856 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.65■□□□□ 0.74
CLDN18P56856 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN18P56856 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN18P56856 AC010141.3-201ENST00000456659 717 ntBASIC19.65■□□□□ 0.74
CLDN18P56856 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.65■□□□□ 0.74
CLDN18P56856 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.65■□□□□ 0.74
CLDN18P56856 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.65■□□□□ 0.74
CLDN18P56856 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CLDN18P56856 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN18P56856 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CLDN18P56856 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN18P56856 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.65■□□□□ 0.74
CLDN18P56856 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CLDN18P56856 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
CLDN18P56856 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CLDN18P56856 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLDN18P56856 AC027612.3-201ENST00000413684 1047 ntBASIC19.64■□□□□ 0.73
CLDN18P56856 MIR6084-201ENST00000622012 110 ntBASIC19.64■□□□□ 0.73
CLDN18P56856 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLDN18P56856 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms