Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 AC010997.5-201ENST00000609182 354 ntBASIC20.94■□□□□ 0.94
CLDN8P56748 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.94■□□□□ 0.94
CLDN8P56748 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLDN8P56748 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CLDN8P56748 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.94■□□□□ 0.94
CLDN8P56748 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CLDN8P56748 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.94■□□□□ 0.94
CLDN8P56748 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLDN8P56748 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CLDN8P56748 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLDN8P56748 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLDN8P56748 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CLDN8P56748 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLDN8P56748 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLDN8P56748 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.93■□□□□ 0.94
CLDN8P56748 AC239859.2-201ENST00000444165 318 ntBASIC20.93■□□□□ 0.94
CLDN8P56748 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CLDN8P56748 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLDN8P56748 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.93■□□□□ 0.94
CLDN8P56748 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLDN8P56748 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CLDN8P56748 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CLDN8P56748 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.93■□□□□ 0.94
CLDN8P56748 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.93■□□□□ 0.94
CLDN8P56748 C17orf82-201ENST00000623772 1530 ntBASIC20.93■□□□□ 0.94
CLDN8P56748 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CLDN8P56748 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.92■□□□□ 0.94
CLDN8P56748 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
CLDN8P56748 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLDN8P56748 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.92■□□□□ 0.94
CLDN8P56748 RARRES2P1-201ENST00000474487 481 ntBASIC20.92■□□□□ 0.94
CLDN8P56748 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLDN8P56748 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLDN8P56748 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.92■□□□□ 0.94
CLDN8P56748 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLDN8P56748 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
CLDN8P56748 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CLDN8P56748 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLDN8P56748 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CLDN8P56748 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.91■□□□□ 0.94
CLDN8P56748 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLDN8P56748 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLDN8P56748 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLDN8P56748 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLDN8P56748 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLDN8P56748 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLDN8P56748 AC004687.1-201ENST00000579003 1625 ntBASIC20.91■□□□□ 0.94
CLDN8P56748 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.91■□□□□ 0.94
CLDN8P56748 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CLDN8P56748 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.9■□□□□ 0.94
CLDN8P56748 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.9■□□□□ 0.94
CLDN8P56748 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLDN8P56748 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.9■□□□□ 0.94
CLDN8P56748 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLDN8P56748 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.9■□□□□ 0.94
CLDN8P56748 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CLDN8P56748 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLDN8P56748 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.9■□□□□ 0.94
CLDN8P56748 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLDN8P56748 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.9■□□□□ 0.94
CLDN8P56748 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.9■□□□□ 0.94
CLDN8P56748 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.9■□□□□ 0.94
CLDN8P56748 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
CLDN8P56748 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
CLDN8P56748 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.89■□□□□ 0.93
CLDN8P56748 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.89■□□□□ 0.93
CLDN8P56748 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.89■□□□□ 0.93
CLDN8P56748 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLDN8P56748 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
CLDN8P56748 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.89■□□□□ 0.93
CLDN8P56748 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
CLDN8P56748 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CLDN8P56748 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.88■□□□□ 0.93
CLDN8P56748 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CLDN8P56748 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLDN8P56748 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLDN8P56748 AC009299.2-201ENST00000482477 511 ntBASIC20.88■□□□□ 0.93
CLDN8P56748 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CLDN8P56748 CA15P2-201ENST00000611168 834 ntBASIC20.88■□□□□ 0.93
CLDN8P56748 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLDN8P56748 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLDN8P56748 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLDN8P56748 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLDN8P56748 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLDN8P56748 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.87■□□□□ 0.93
CLDN8P56748 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLDN8P56748 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CLDN8P56748 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLDN8P56748 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLDN8P56748 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CLDN8P56748 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
CLDN8P56748 TSPY9P-201ENST00000440215 945 ntBASIC20.87■□□□□ 0.93
CLDN8P56748 TSPY11P-201ENST00000442607 1045 ntBASIC20.87■□□□□ 0.93
CLDN8P56748 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.87■□□□□ 0.93
CLDN8P56748 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.87■□□□□ 0.93
CLDN8P56748 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.87■□□□□ 0.93
CLDN8P56748 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLDN8P56748 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
CLDN8P56748 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.86■□□□□ 0.93
CLDN8P56748 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms