Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDH13P55290 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDH13P55290 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDH13P55290 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDH13P55290 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
CDH13P55290 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.48■■□□□ 1.03
CDH13P55290 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.48■■□□□ 1.03
CDH13P55290 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CDH13P55290 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.48■■□□□ 1.03
CDH13P55290 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.48■■□□□ 1.03
CDH13P55290 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.48■■□□□ 1.03
CDH13P55290 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDH13P55290 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDH13P55290 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
CDH13P55290 C11orf96-202ENST00000528572 1834 ntBASIC21.48■■□□□ 1.03
CDH13P55290 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.47■■□□□ 1.03
CDH13P55290 AC137767.1-201ENST00000602918 1920 ntBASIC21.47■■□□□ 1.03
CDH13P55290 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDH13P55290 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDH13P55290 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDH13P55290 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDH13P55290 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.47■■□□□ 1.03
CDH13P55290 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.47■■□□□ 1.03
CDH13P55290 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.47■■□□□ 1.03
CDH13P55290 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.47■■□□□ 1.03
CDH13P55290 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDH13P55290 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.46■■□□□ 1.03
CDH13P55290 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
CDH13P55290 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CDH13P55290 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.46■■□□□ 1.03
CDH13P55290 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
CDH13P55290 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.46■■□□□ 1.03
CDH13P55290 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CDH13P55290 AL451085.2-201ENST00000605085 799 ntBASIC21.46■■□□□ 1.03
CDH13P55290 AC009086.3-201ENST00000623486 1008 ntBASIC21.46■■□□□ 1.03
CDH13P55290 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CDH13P55290 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.46■■□□□ 1.03
CDH13P55290 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.46■■□□□ 1.03
CDH13P55290 AC007375.3-201ENST00000600936 2314 ntBASIC21.46■■□□□ 1.03
CDH13P55290 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDH13P55290 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDH13P55290 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDH13P55290 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDH13P55290 LINC01960-201ENST00000563759 1884 ntBASIC21.45■■□□□ 1.02
CDH13P55290 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDH13P55290 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDH13P55290 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDH13P55290 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
CDH13P55290 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CDH13P55290 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDH13P55290 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.45■■□□□ 1.02
CDH13P55290 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDH13P55290 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.45■■□□□ 1.02
CDH13P55290 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
CDH13P55290 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
CDH13P55290 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDH13P55290 AC004687.1-201ENST00000579003 1625 ntBASIC21.44■■□□□ 1.02
CDH13P55290 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CDH13P55290 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDH13P55290 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDH13P55290 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDH13P55290 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
CDH13P55290 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDH13P55290 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDH13P55290 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.43■■□□□ 1.02
CDH13P55290 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDH13P55290 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDH13P55290 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
CDH13P55290 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.43■■□□□ 1.02
CDH13P55290 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CDH13P55290 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDH13P55290 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDH13P55290 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDH13P55290 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CDH13P55290 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDH13P55290 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.42■■□□□ 1.02
CDH13P55290 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDH13P55290 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.42■■□□□ 1.02
CDH13P55290 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CDH13P55290 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDH13P55290 C17orf82-201ENST00000623772 1530 ntBASIC21.42■■□□□ 1.02
CDH13P55290 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.41■■□□□ 1.02
CDH13P55290 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.41■■□□□ 1.02
CDH13P55290 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDH13P55290 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.41■■□□□ 1.02
CDH13P55290 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDH13P55290 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDH13P55290 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDH13P55290 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.41■■□□□ 1.02
CDH13P55290 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.4■■□□□ 1.02
CDH13P55290 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
CDH13P55290 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.4■■□□□ 1.02
CDH13P55290 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDH13P55290 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CDH13P55290 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDH13P55290 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDH13P55290 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.4■■□□□ 1.02
CDH13P55290 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.4■■□□□ 1.02
CDH13P55290 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
CDH13P55290 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms