Protein–RNA interactions for Protein: P54852

EMP3, Epithelial membrane protein 3, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EMP3P54852 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
EMP3P54852 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
EMP3P54852 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
EMP3P54852 EDA-201ENST00000338901 1233 ntBASIC21.26■□□□□ 0.99
EMP3P54852 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.26■□□□□ 0.99
EMP3P54852 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.26■□□□□ 0.99
EMP3P54852 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
EMP3P54852 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.26■□□□□ 0.99
EMP3P54852 AC024257.2-201ENST00000549699 147 ntBASIC21.26■□□□□ 0.99
EMP3P54852 MIR3181-201ENST00000578512 73 ntBASIC21.26■□□□□ 0.99
EMP3P54852 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
EMP3P54852 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
EMP3P54852 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
EMP3P54852 LINC01529-204ENST00000636474 1715 ntBASIC21.26■□□□□ 0.99
EMP3P54852 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
EMP3P54852 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.25■□□□□ 0.99
EMP3P54852 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
EMP3P54852 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.25■□□□□ 0.99
EMP3P54852 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
EMP3P54852 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
EMP3P54852 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
EMP3P54852 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
EMP3P54852 AC006455.2-201ENST00000429931 906 ntBASIC21.25■□□□□ 0.99
EMP3P54852 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.25■□□□□ 0.99
EMP3P54852 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.25■□□□□ 0.99
EMP3P54852 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.25■□□□□ 0.99
EMP3P54852 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
EMP3P54852 AL499627.2-201ENST00000606283 725 ntBASIC21.25■□□□□ 0.99
EMP3P54852 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
EMP3P54852 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
EMP3P54852 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
EMP3P54852 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
EMP3P54852 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
EMP3P54852 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
EMP3P54852 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
EMP3P54852 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.24■□□□□ 0.99
EMP3P54852 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
EMP3P54852 AC136469.2-201ENST00000623944 1028 ntBASIC21.24■□□□□ 0.99
EMP3P54852 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
EMP3P54852 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
EMP3P54852 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
EMP3P54852 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
EMP3P54852 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
EMP3P54852 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.24■□□□□ 0.99
EMP3P54852 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
EMP3P54852 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
EMP3P54852 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
EMP3P54852 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
EMP3P54852 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
EMP3P54852 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
EMP3P54852 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.23■□□□□ 0.99
EMP3P54852 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
EMP3P54852 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
EMP3P54852 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
EMP3P54852 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
EMP3P54852 AC005837.3-201ENST00000612163 286 ntBASIC21.23■□□□□ 0.99
EMP3P54852 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.23■□□□□ 0.99
EMP3P54852 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.23■□□□□ 0.99
EMP3P54852 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
EMP3P54852 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
EMP3P54852 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
EMP3P54852 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
EMP3P54852 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.22■□□□□ 0.99
EMP3P54852 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
EMP3P54852 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.22■□□□□ 0.99
EMP3P54852 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.22■□□□□ 0.99
EMP3P54852 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.22■□□□□ 0.99
EMP3P54852 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.22■□□□□ 0.99
EMP3P54852 AL355001.2-201ENST00000620617 1191 ntBASIC21.22■□□□□ 0.99
EMP3P54852 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
EMP3P54852 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
EMP3P54852 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.22■□□□□ 0.99
EMP3P54852 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.21■□□□□ 0.99
EMP3P54852 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.21■□□□□ 0.99
EMP3P54852 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
EMP3P54852 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.21■□□□□ 0.99
EMP3P54852 pRNA.6-201ENST00000610482 90 ntBASIC21.21■□□□□ 0.99
EMP3P54852 pRNA.5-201ENST00000612139 90 ntBASIC21.21■□□□□ 0.99
EMP3P54852 pRNA.11-201ENST00000618423 90 ntBASIC21.21■□□□□ 0.99
EMP3P54852 pRNA.13-201ENST00000619112 90 ntBASIC21.21■□□□□ 0.99
EMP3P54852 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
EMP3P54852 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.21■□□□□ 0.99
EMP3P54852 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
EMP3P54852 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
EMP3P54852 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.21■□□□□ 0.99
EMP3P54852 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
EMP3P54852 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.2■□□□□ 0.98
EMP3P54852 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.2■□□□□ 0.98
EMP3P54852 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.2■□□□□ 0.98
EMP3P54852 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
EMP3P54852 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
EMP3P54852 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
EMP3P54852 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
EMP3P54852 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
EMP3P54852 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
EMP3P54852 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
EMP3P54852 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
EMP3P54852 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
EMP3P54852 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
EMP3P54852 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms