Protein–RNA interactions for Protein: P53549

RPT4, 26S proteasome subunit RPT4, yeastyeast

Known RBP Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPT4P53549 tC(GCA)P1tC(GCA)P1 72 nt4.44□□□□□ -1.7
RPT4P53549 tC(GCA)P2tC(GCA)P2 72 nt4.44□□□□□ -1.7
RPT4P53549 YDR193WYDR193W 399 nt4.44□□□□□ -1.7
RPT4P53549 NPY1YGL067W 1155 nt4.44□□□□□ -1.7
RPT4P53549 IKS1YJL057C 2004 nt4.44□□□□□ -1.7
RPT4P53549 HFD1YMR110C 1599 nt4.44□□□□□ -1.7
RPT4P53549 CDC15YAR019C 2925 nt4.43□□□□□ -1.7
RPT4P53549 YDR261C-DYDR261C-D 4815 nt4.43□□□□□ -1.7
RPT4P53549 RPL34AYER056C-A 366 nt4.43□□□□□ -1.7
RPT4P53549 YER067C-AYER067C-A 324 nt4.43□□□□□ -1.7
RPT4P53549 YGR269WYGR269W 327 nt4.43□□□□□ -1.7
RPT4P53549 YHR212W-AYHR212W-A 204 nt4.43□□□□□ -1.7
RPT4P53549 GTT1YIR038C 705 nt4.43□□□□□ -1.7
RPT4P53549 PIR3YKL163W 978 nt4.43□□□□□ -1.7
RPT4P53549 UPS2YLR168C 693 nt4.43□□□□□ -1.7
RPT4P53549 YAR061WYAR061W 204 nt4.43□□□□□ -1.7
RPT4P53549 CDC21YOR074C 915 nt4.43□□□□□ -1.7
RPT4P53549 snR34snR34 203 nt4.43□□□□□ -1.7
RPT4P53549 ORC6YHR118C 1308 nt4.43□□□□□ -1.7
RPT4P53549 TGL1YKL140W 1647 nt4.43□□□□□ -1.7
RPT4P53549 MDM34YGL219C 1380 nt4.42□□□□□ -1.7
RPT4P53549 YDR271CYDR271C 372 nt4.42□□□□□ -1.7
RPT4P53549 TFB3YDR460W 966 nt4.42□□□□□ -1.7
RPT4P53549 LPP1YDR503C 825 nt4.42□□□□□ -1.7
RPT4P53549 EDC1YGL222C 528 nt4.42□□□□□ -1.7
RPT4P53549 ADD66YKL206C 804 nt4.42□□□□□ -1.7
RPT4P53549 YLR049CYLR049C 1287 nt4.42□□□□□ -1.7
RPT4P53549 SIW14YNL032W 846 nt4.42□□□□□ -1.7
RPT4P53549 FES1YBR101C 873 nt4.42□□□□□ -1.7
RPT4P53549 TPA1YER049W 1935 nt4.42□□□□□ -1.7
RPT4P53549 NOG1YPL093W 1944 nt4.42□□□□□ -1.7
RPT4P53549 YHL012WYHL012W 1482 nt4.42□□□□□ -1.7
RPT4P53549 SBE2YDR351W 2595 nt4.42□□□□□ -1.7
RPT4P53549 PRR2YDL214C 2100 nt4.42□□□□□ -1.7
RPT4P53549 YND1YER005W 1893 nt4.41□□□□□ -1.7
RPT4P53549 YDL124WYDL124W 939 nt4.41□□□□□ -1.7
RPT4P53549 YFL041W-AYFL041W-A 192 nt4.41□□□□□ -1.7
RPT4P53549 YGL101WYGL101W 648 nt4.41□□□□□ -1.7
RPT4P53549 RPL8AYHL033C 771 nt4.41□□□□□ -1.7
RPT4P53549 MNN11YJL183W 1269 nt4.41□□□□□ -1.7
RPT4P53549 CPR6YLR216C 1116 nt4.41□□□□□ -1.7
RPT4P53549 VPS71YML041C 843 nt4.41□□□□□ -1.7
RPT4P53549 YOR034C-AYOR034C-A 243 nt4.41□□□□□ -1.7
RPT4P53549 SET6YPL165C 1122 nt4.41□□□□□ -1.7
RPT4P53549 CMR3YPR013C 954 nt4.41□□□□□ -1.7
RPT4P53549 YBR134WYBR134W 402 nt4.41□□□□□ -1.7
RPT4P53549 HOT1YMR172W 2160 nt4.41□□□□□ -1.7
RPT4P53549 ACE2YLR131C 2313 nt4.4□□□□□ -1.7
RPT4P53549 TFA1YKL028W 1449 nt4.4□□□□□ -1.7
RPT4P53549 FOL2YGR267C 732 nt4.4□□□□□ -1.71
RPT4P53549 JLP1YLL057C 1239 nt4.4□□□□□ -1.71
RPT4P53549 EMG1YLR186W 759 nt4.4□□□□□ -1.71
RPT4P53549 VPS28YPL065W 729 nt4.4□□□□□ -1.71
RPT4P53549 FDC1YDR539W 1512 nt4.4□□□□□ -1.71
RPT4P53549 PFK1YGR240C 2964 nt4.4□□□□□ -1.71
RPT4P53549 TRM13YOL125W 1431 nt4.39□□□□□ -1.71
RPT4P53549 YCR050CYCR050C 309 nt4.39□□□□□ -1.71
RPT4P53549 MCM21YDR318W 1107 nt4.39□□□□□ -1.71
RPT4P53549 YKL071WYKL071W 771 nt4.39□□□□□ -1.71
RPT4P53549 COQ5YML110C 924 nt4.39□□□□□ -1.71
RPT4P53549 SHE1YBL031W 1017 nt4.39□□□□□ -1.71
RPT4P53549 RIB4YOL143C 510 nt4.39□□□□□ -1.71
RPT4P53549 MPD1YOR288C 957 nt4.39□□□□□ -1.71
RPT4P53549 PUS9YDL036C 1389 nt4.39□□□□□ -1.71
RPT4P53549 ENT1YDL161W 1365 nt4.39□□□□□ -1.71
RPT4P53549 FMP30YPL103C 1407 nt4.38□□□□□ -1.71
RPT4P53549 VMA22YHR060W 546 nt4.38□□□□□ -1.71
RPT4P53549 SPO16YHR153C 597 nt4.38□□□□□ -1.71
RPT4P53549 RPL22AYLR061W 366 nt4.38□□□□□ -1.71
RPT4P53549 SPC3YLR066W 555 nt4.38□□□□□ -1.71
RPT4P53549 YLR462WYLR462W 609 nt4.38□□□□□ -1.71
RPT4P53549 YMR114CYMR114C 1107 nt4.38□□□□□ -1.71
RPT4P53549 MFM1YPL060W 1242 nt4.38□□□□□ -1.71
RPT4P53549 MDR1YGR100W 2853 nt4.38□□□□□ -1.71
RPT4P53549 IDS2YJL146W 1410 nt4.38□□□□□ -1.71
RPT4P53549 STR2YJR130C 1920 nt4.37□□□□□ -1.71
RPT4P53549 YPK3YBR028C 1578 nt4.37□□□□□ -1.71
RPT4P53549 ERG5YMR015C 1617 nt4.37□□□□□ -1.71
RPT4P53549 YGL193CYGL193C 312 nt4.37□□□□□ -1.71
RPT4P53549 YHL049CYHL049C 816 nt4.37□□□□□ -1.71
RPT4P53549 ISA1YLL027W 753 nt4.37□□□□□ -1.71
RPT4P53549 VPS53YJL029C 2469 nt4.37□□□□□ -1.71
RPT4P53549 TRM44YPL030W 1704 nt4.37□□□□□ -1.71
RPT4P53549 SRP72YPL210C 1923 nt4.36□□□□□ -1.71
RPT4P53549 NGL3YML118W 1518 nt4.36□□□□□ -1.71
RPT4P53549 NCR1YPL006W 3513 nt4.36□□□□□ -1.71
RPT4P53549 GPI13YLL031C 3054 nt4.36□□□□□ -1.71
RPT4P53549 UPC2YDR213W 2742 nt4.36□□□□□ -1.71
RPT4P53549 BUD30YDL151C 582 nt4.36□□□□□ -1.71
RPT4P53549 RPA14YDR156W 414 nt4.36□□□□□ -1.71
RPT4P53549 YDR391CYDR391C 699 nt4.36□□□□□ -1.71
RPT4P53549 YRA2YKL214C 612 nt4.36□□□□□ -1.71
RPT4P53549 RPS1BYML063W 768 nt4.36□□□□□ -1.71
RPT4P53549 YML119WYML119W 1074 nt4.36□□□□□ -1.71
RPT4P53549 IME4YGL192W 1803 nt4.36□□□□□ -1.71
RPT4P53549 SSA2YLL024C 1920 nt4.36□□□□□ -1.71
RPT4P53549 MCM7YBR202W 2538 nt4.36□□□□□ -1.71
RPT4P53549 SOF1YLL011W 1470 nt4.36□□□□□ -1.71
RPT4P53549 TIF4632YGL049C 2745 nt4.36□□□□□ -1.71
RPT4P53549 NPL4YBR170C 1743 nt4.35□□□□□ -1.71
Retrieved 100 of 7,029 protein–RNA pairs in 20.9 ms