Protein–RNA interactions for Protein: P51608

MECP2, Methyl-CpG-binding protein 2, humanhuman

Known RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2P51608 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
MECP2P51608 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
MECP2P51608 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.58
MECP2P51608 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
MECP2P51608 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
MECP2P51608 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MECP2P51608 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MECP2P51608 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MECP2P51608 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
MECP2P51608 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC18.7■□□□□ 0.58
MECP2P51608 ABHD17AP5-201ENST00000580133 923 ntBASIC18.7■□□□□ 0.58
MECP2P51608 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC18.7■□□□□ 0.58
MECP2P51608 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC18.7■□□□□ 0.58
MECP2P51608 AC005229.4-201ENST00000610085 2198 ntBASIC18.7■□□□□ 0.58
MECP2P51608 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MECP2P51608 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MECP2P51608 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
MECP2P51608 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MECP2P51608 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MECP2P51608 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.7■□□□□ 0.58
MECP2P51608 ALDH1A3-203ENST00000557963 1670 ntBASIC18.69■□□□□ 0.58
MECP2P51608 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC18.69■□□□□ 0.58
MECP2P51608 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MECP2P51608 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MECP2P51608 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
MECP2P51608 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.69■□□□□ 0.58
MECP2P51608 AL022069.1-201ENST00000568025 1636 ntBASIC18.69■□□□□ 0.58
MECP2P51608 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.69■□□□□ 0.58
MECP2P51608 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MECP2P51608 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MECP2P51608 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MECP2P51608 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MECP2P51608 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MECP2P51608 AC087742.1-201ENST00000575880 1738 ntBASIC18.69■□□□□ 0.58
MECP2P51608 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
MECP2P51608 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
MECP2P51608 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.68■□□□□ 0.58
MECP2P51608 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MECP2P51608 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MECP2P51608 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
MECP2P51608 HES4-204ENST00000484667 667 ntTSL 3 BASIC18.68■□□□□ 0.58
MECP2P51608 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
MECP2P51608 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MECP2P51608 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MECP2P51608 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MECP2P51608 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.68■□□□□ 0.58
MECP2P51608 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MECP2P51608 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
MECP2P51608 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.67■□□□□ 0.58
MECP2P51608 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MECP2P51608 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MECP2P51608 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
MECP2P51608 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MECP2P51608 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.67■□□□□ 0.58
MECP2P51608 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MECP2P51608 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MECP2P51608 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MECP2P51608 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MECP2P51608 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
MECP2P51608 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MECP2P51608 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.66■□□□□ 0.58
MECP2P51608 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MECP2P51608 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MECP2P51608 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MECP2P51608 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
MECP2P51608 RAP2CP1-202ENST00000605179 643 ntBASIC18.66■□□□□ 0.58
MECP2P51608 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MECP2P51608 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MECP2P51608 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.66■□□□□ 0.58
MECP2P51608 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.66■□□□□ 0.58
MECP2P51608 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
MECP2P51608 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
MECP2P51608 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
MECP2P51608 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
MECP2P51608 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
MECP2P51608 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MECP2P51608 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
MECP2P51608 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
MECP2P51608 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.66■□□□□ 0.58
MECP2P51608 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
MECP2P51608 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MECP2P51608 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MECP2P51608 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
MECP2P51608 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MECP2P51608 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MECP2P51608 AC026202.3-201ENST00000600805 1127 ntBASIC18.65■□□□□ 0.58
MECP2P51608 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MECP2P51608 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MECP2P51608 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.65■□□□□ 0.58
MECP2P51608 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MECP2P51608 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
MECP2P51608 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.64■□□□□ 0.58
MECP2P51608 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.64■□□□□ 0.57
MECP2P51608 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC18.64■□□□□ 0.57
MECP2P51608 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MECP2P51608 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MECP2P51608 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MECP2P51608 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.64■□□□□ 0.57
MECP2P51608 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
MECP2P51608 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms