Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.94■□□□□ 0.94
GABRA4P48169 AC012414.1-201ENST00000556676 535 ntBASIC20.94■□□□□ 0.94
GABRA4P48169 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.94■□□□□ 0.94
GABRA4P48169 AL358852.1-201ENST00000623174 1268 ntBASIC20.94■□□□□ 0.94
GABRA4P48169 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
GABRA4P48169 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.94■□□□□ 0.94
GABRA4P48169 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
GABRA4P48169 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.94■□□□□ 0.94
GABRA4P48169 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.93■□□□□ 0.94
GABRA4P48169 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
GABRA4P48169 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
GABRA4P48169 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
GABRA4P48169 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
GABRA4P48169 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.93■□□□□ 0.94
GABRA4P48169 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.93■□□□□ 0.94
GABRA4P48169 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.93■□□□□ 0.94
GABRA4P48169 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
GABRA4P48169 AC087623.3-201ENST00000607047 1098 ntBASIC20.93■□□□□ 0.94
GABRA4P48169 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.93■□□□□ 0.94
GABRA4P48169 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
GABRA4P48169 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
GABRA4P48169 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GABRA4P48169 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GABRA4P48169 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GABRA4P48169 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
GABRA4P48169 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
GABRA4P48169 AC027612.3-201ENST00000413684 1047 ntBASIC20.92■□□□□ 0.94
GABRA4P48169 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
GABRA4P48169 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.92■□□□□ 0.94
GABRA4P48169 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.92■□□□□ 0.94
GABRA4P48169 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.92■□□□□ 0.94
GABRA4P48169 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.92■□□□□ 0.94
GABRA4P48169 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
GABRA4P48169 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
GABRA4P48169 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.92■□□□□ 0.94
GABRA4P48169 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GABRA4P48169 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
GABRA4P48169 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
GABRA4P48169 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
GABRA4P48169 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.91■□□□□ 0.94
GABRA4P48169 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
GABRA4P48169 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.91■□□□□ 0.94
GABRA4P48169 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
GABRA4P48169 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.91■□□□□ 0.94
GABRA4P48169 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.91■□□□□ 0.94
GABRA4P48169 AL354811.1-201ENST00000610286 706 ntBASIC20.91■□□□□ 0.94
GABRA4P48169 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.91■□□□□ 0.94
GABRA4P48169 MIR6084-201ENST00000622012 110 ntBASIC20.91■□□□□ 0.94
GABRA4P48169 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
GABRA4P48169 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
GABRA4P48169 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
GABRA4P48169 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.9■□□□□ 0.94
GABRA4P48169 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
GABRA4P48169 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.9■□□□□ 0.94
GABRA4P48169 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GABRA4P48169 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
GABRA4P48169 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GABRA4P48169 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GABRA4P48169 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.9■□□□□ 0.94
GABRA4P48169 AC010141.3-201ENST00000456659 717 ntBASIC20.9■□□□□ 0.94
GABRA4P48169 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GABRA4P48169 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GABRA4P48169 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
GABRA4P48169 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.89■□□□□ 0.94
GABRA4P48169 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
GABRA4P48169 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
GABRA4P48169 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.89■□□□□ 0.94
GABRA4P48169 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.89■□□□□ 0.93
GABRA4P48169 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.89■□□□□ 0.93
GABRA4P48169 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.89■□□□□ 0.93
GABRA4P48169 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.89■□□□□ 0.93
GABRA4P48169 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
GABRA4P48169 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
GABRA4P48169 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
GABRA4P48169 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
GABRA4P48169 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
GABRA4P48169 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.88■□□□□ 0.93
GABRA4P48169 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GABRA4P48169 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.88■□□□□ 0.93
GABRA4P48169 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GABRA4P48169 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
GABRA4P48169 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.88■□□□□ 0.93
GABRA4P48169 YBX1P1-201ENST00000445822 960 ntBASIC20.88■□□□□ 0.93
GABRA4P48169 MIR5787-201ENST00000611784 55 ntBASIC20.88■□□□□ 0.93
GABRA4P48169 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.88■□□□□ 0.93
GABRA4P48169 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
GABRA4P48169 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.88■□□□□ 0.93
GABRA4P48169 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GABRA4P48169 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
GABRA4P48169 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
GABRA4P48169 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GABRA4P48169 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GABRA4P48169 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
GABRA4P48169 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.87■□□□□ 0.93
GABRA4P48169 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.87■□□□□ 0.93
GABRA4P48169 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
GABRA4P48169 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
GABRA4P48169 AC105233.4-201ENST00000642045 216 ntBASIC20.87■□□□□ 0.93
GABRA4P48169 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.87■□□□□ 0.93
GABRA4P48169 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms