Protein–RNA interactions for Protein: P35542

SAA4, Serum amyloid A-4 protein, humanhuman

Predictions only

Length 130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA4P35542 EI24-211ENST00000534546 1544 ntTSL 2 BASIC17.8■□□□□ 0.44
SAA4P35542 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SAA4P35542 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC17.8■□□□□ 0.44
SAA4P35542 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SAA4P35542 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SAA4P35542 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SAA4P35542 AK1-201ENST00000223836 736 ntTSL 3 BASIC17.79■□□□□ 0.44
SAA4P35542 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SAA4P35542 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SAA4P35542 AC026271.2-201ENST00000428091 497 ntBASIC17.79■□□□□ 0.44
SAA4P35542 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SAA4P35542 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SAA4P35542 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SAA4P35542 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC17.79■□□□□ 0.44
SAA4P35542 AC087239.1-201ENST00000622671 572 ntBASIC17.79■□□□□ 0.44
SAA4P35542 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SAA4P35542 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC17.79■□□□□ 0.44
SAA4P35542 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC17.79■□□□□ 0.44
SAA4P35542 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SAA4P35542 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SAA4P35542 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SAA4P35542 DUSP8P3-201ENST00000399571 1760 ntBASIC17.79■□□□□ 0.44
SAA4P35542 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC17.79■□□□□ 0.44
SAA4P35542 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC17.78■□□□□ 0.44
SAA4P35542 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
SAA4P35542 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SAA4P35542 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SAA4P35542 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SAA4P35542 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SAA4P35542 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SAA4P35542 LHPP-203ENST00000392757 840 ntTSL 3 BASIC17.78■□□□□ 0.44
SAA4P35542 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SAA4P35542 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SAA4P35542 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SAA4P35542 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SAA4P35542 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
SAA4P35542 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC17.77■□□□□ 0.44
SAA4P35542 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC17.77■□□□□ 0.44
SAA4P35542 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SAA4P35542 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SAA4P35542 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC17.77■□□□□ 0.44
SAA4P35542 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC17.77■□□□□ 0.44
SAA4P35542 SP2-202ENST00000613139 908 ntTSL 5 BASIC17.77■□□□□ 0.44
SAA4P35542 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC17.77■□□□□ 0.44
SAA4P35542 AL358852.1-201ENST00000623174 1268 ntBASIC17.77■□□□□ 0.44
SAA4P35542 AL031602.1-201ENST00000633169 911 ntBASIC17.77■□□□□ 0.44
SAA4P35542 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SAA4P35542 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
SAA4P35542 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SAA4P35542 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
SAA4P35542 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC17.77■□□□□ 0.43
SAA4P35542 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC17.77■□□□□ 0.43
SAA4P35542 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SAA4P35542 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
SAA4P35542 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SAA4P35542 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
SAA4P35542 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SAA4P35542 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SAA4P35542 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
SAA4P35542 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SAA4P35542 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SAA4P35542 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SAA4P35542 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC17.76■□□□□ 0.43
SAA4P35542 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC17.76■□□□□ 0.43
SAA4P35542 AC012414.1-201ENST00000556676 535 ntBASIC17.76■□□□□ 0.43
SAA4P35542 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC17.76■□□□□ 0.43
SAA4P35542 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SAA4P35542 AL354811.1-201ENST00000610286 706 ntBASIC17.76■□□□□ 0.43
SAA4P35542 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SAA4P35542 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SAA4P35542 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SAA4P35542 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SAA4P35542 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC17.76■□□□□ 0.43
SAA4P35542 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SAA4P35542 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SAA4P35542 RARA-203ENST00000394086 2008 ntTSL 2 BASIC17.76■□□□□ 0.43
SAA4P35542 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SAA4P35542 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC17.75■□□□□ 0.43
SAA4P35542 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SAA4P35542 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
SAA4P35542 AC097381.1-201ENST00000429019 1296 ntBASIC17.75■□□□□ 0.43
SAA4P35542 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SAA4P35542 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC17.75■□□□□ 0.43
SAA4P35542 MIR6821-201ENST00000617625 74 ntBASIC17.75■□□□□ 0.43
SAA4P35542 MIR6084-201ENST00000622012 110 ntBASIC17.75■□□□□ 0.43
SAA4P35542 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SAA4P35542 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SAA4P35542 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC17.75■□□□□ 0.43
SAA4P35542 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SAA4P35542 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SAA4P35542 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SAA4P35542 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SAA4P35542 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SAA4P35542 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC17.74■□□□□ 0.43
SAA4P35542 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SAA4P35542 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SAA4P35542 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SAA4P35542 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SAA4P35542 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SAA4P35542 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms