Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
SLC6A4P31645 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.66■■□□□ 1.22
SLC6A4P31645 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SLC6A4P31645 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SLC6A4P31645 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SLC6A4P31645 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC22.66■■□□□ 1.22
SLC6A4P31645 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC22.66■■□□□ 1.22
SLC6A4P31645 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SLC6A4P31645 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SLC6A4P31645 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC22.65■■□□□ 1.22
SLC6A4P31645 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
SLC6A4P31645 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SLC6A4P31645 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
SLC6A4P31645 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
SLC6A4P31645 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SLC6A4P31645 MIR572-201ENST00000384983 95 ntBASIC22.65■■□□□ 1.22
SLC6A4P31645 AC026271.2-201ENST00000428091 497 ntBASIC22.65■■□□□ 1.22
SLC6A4P31645 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC22.65■■□□□ 1.22
SLC6A4P31645 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC22.65■■□□□ 1.22
SLC6A4P31645 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC22.65■■□□□ 1.22
SLC6A4P31645 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC22.65■■□□□ 1.22
SLC6A4P31645 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SLC6A4P31645 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SLC6A4P31645 CASK-201ENST00000378154 2494 ntTSL 5 BASIC22.65■■□□□ 1.22
SLC6A4P31645 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC22.65■■□□□ 1.22
SLC6A4P31645 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
SLC6A4P31645 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
SLC6A4P31645 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
SLC6A4P31645 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC22.64■■□□□ 1.22
SLC6A4P31645 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.22
SLC6A4P31645 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
SLC6A4P31645 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
SLC6A4P31645 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC22.64■■□□□ 1.21
SLC6A4P31645 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC22.64■■□□□ 1.21
SLC6A4P31645 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
SLC6A4P31645 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
SLC6A4P31645 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SLC6A4P31645 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC22.63■■□□□ 1.21
SLC6A4P31645 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC22.63■■□□□ 1.21
SLC6A4P31645 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SLC6A4P31645 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC22.63■■□□□ 1.21
SLC6A4P31645 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC22.63■■□□□ 1.21
SLC6A4P31645 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SLC6A4P31645 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
SLC6A4P31645 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC22.63■■□□□ 1.21
SLC6A4P31645 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC22.63■■□□□ 1.21
SLC6A4P31645 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC22.63■■□□□ 1.21
SLC6A4P31645 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SLC6A4P31645 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SLC6A4P31645 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC22.62■■□□□ 1.21
SLC6A4P31645 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
SLC6A4P31645 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SLC6A4P31645 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SLC6A4P31645 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SLC6A4P31645 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC22.62■■□□□ 1.21
SLC6A4P31645 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SLC6A4P31645 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC22.62■■□□□ 1.21
SLC6A4P31645 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC22.61■■□□□ 1.21
SLC6A4P31645 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC22.61■■□□□ 1.21
SLC6A4P31645 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC22.61■■□□□ 1.21
SLC6A4P31645 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SLC6A4P31645 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC22.61■■□□□ 1.21
SLC6A4P31645 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC22.61■■□□□ 1.21
SLC6A4P31645 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC22.61■■□□□ 1.21
SLC6A4P31645 DUSP8P5-201ENST00000422884 1815 ntBASIC22.61■■□□□ 1.21
SLC6A4P31645 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SLC6A4P31645 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SLC6A4P31645 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SLC6A4P31645 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SLC6A4P31645 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC22.6■■□□□ 1.21
SLC6A4P31645 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC22.6■■□□□ 1.21
SLC6A4P31645 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC22.6■■□□□ 1.21
SLC6A4P31645 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SLC6A4P31645 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SLC6A4P31645 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC22.6■■□□□ 1.21
SLC6A4P31645 RARA-203ENST00000394086 2008 ntTSL 2 BASIC22.6■■□□□ 1.21
SLC6A4P31645 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SLC6A4P31645 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC22.6■■□□□ 1.21
SLC6A4P31645 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC22.59■■□□□ 1.21
SLC6A4P31645 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SLC6A4P31645 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC22.59■■□□□ 1.21
SLC6A4P31645 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC22.59■■□□□ 1.21
SLC6A4P31645 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SLC6A4P31645 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC22.59■■□□□ 1.21
SLC6A4P31645 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SLC6A4P31645 AC068587.7-201ENST00000641602 218 ntBASIC22.59■■□□□ 1.21
SLC6A4P31645 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SLC6A4P31645 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SLC6A4P31645 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC22.59■■□□□ 1.21
SLC6A4P31645 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
SLC6A4P31645 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC22.59■■□□□ 1.21
SLC6A4P31645 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC22.58■■□□□ 1.21
SLC6A4P31645 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
SLC6A4P31645 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SLC6A4P31645 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC22.58■■□□□ 1.21
SLC6A4P31645 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SLC6A4P31645 USP45-205ENST00000472914 1617 ntTSL 5 BASIC22.58■■□□□ 1.21
SLC6A4P31645 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
SLC6A4P31645 LHPP-203ENST00000392757 840 ntTSL 3 BASIC22.58■■□□□ 1.21
SLC6A4P31645 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms