Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTPN6P29350 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTPN6P29350 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTPN6P29350 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
PTPN6P29350 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
PTPN6P29350 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
PTPN6P29350 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
PTPN6P29350 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTPN6P29350 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PTPN6P29350 C11orf96-202ENST00000528572 1834 ntBASIC20.9■□□□□ 0.94
PTPN6P29350 LINC01529-204ENST00000636474 1715 ntBASIC20.9■□□□□ 0.94
PTPN6P29350 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
PTPN6P29350 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PTPN6P29350 AC007375.3-201ENST00000600936 2314 ntBASIC20.89■□□□□ 0.94
PTPN6P29350 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.93
PTPN6P29350 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
PTPN6P29350 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PTPN6P29350 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PTPN6P29350 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.89■□□□□ 0.93
PTPN6P29350 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
PTPN6P29350 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.89■□□□□ 0.93
PTPN6P29350 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.89■□□□□ 0.93
PTPN6P29350 AL117332.1-201ENST00000622628 974 ntBASIC20.89■□□□□ 0.93
PTPN6P29350 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PTPN6P29350 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
PTPN6P29350 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
PTPN6P29350 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
PTPN6P29350 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.88■□□□□ 0.93
PTPN6P29350 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PTPN6P29350 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PTPN6P29350 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PTPN6P29350 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PTPN6P29350 FP325331.1-202ENST00000623531 1380 ntBASIC20.87■□□□□ 0.93
PTPN6P29350 AC005703.6-201ENST00000623265 1329 ntBASIC20.87■□□□□ 0.93
PTPN6P29350 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PTPN6P29350 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PTPN6P29350 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.87■□□□□ 0.93
PTPN6P29350 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.87■□□□□ 0.93
PTPN6P29350 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PTPN6P29350 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PTPN6P29350 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.87■□□□□ 0.93
PTPN6P29350 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PTPN6P29350 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PTPN6P29350 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.86■□□□□ 0.93
PTPN6P29350 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
PTPN6P29350 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.86■□□□□ 0.93
PTPN6P29350 MIR3621-201ENST00000580529 85 ntBASIC20.86■□□□□ 0.93
PTPN6P29350 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PTPN6P29350 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
PTPN6P29350 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.86■□□□□ 0.93
PTPN6P29350 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PTPN6P29350 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
PTPN6P29350 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PTPN6P29350 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PTPN6P29350 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.85■□□□□ 0.93
PTPN6P29350 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PTPN6P29350 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.85■□□□□ 0.93
PTPN6P29350 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.85■□□□□ 0.93
PTPN6P29350 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.85■□□□□ 0.93
PTPN6P29350 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PTPN6P29350 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PTPN6P29350 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
PTPN6P29350 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
PTPN6P29350 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PTPN6P29350 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PTPN6P29350 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
PTPN6P29350 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PTPN6P29350 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.84■□□□□ 0.93
PTPN6P29350 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.84■□□□□ 0.93
PTPN6P29350 AL356740.2-201ENST00000601559 647 ntBASIC20.84■□□□□ 0.93
PTPN6P29350 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PTPN6P29350 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PTPN6P29350 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.84■□□□□ 0.93
PTPN6P29350 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PTPN6P29350 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PTPN6P29350 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
PTPN6P29350 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
PTPN6P29350 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.83■□□□□ 0.93
PTPN6P29350 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.83■□□□□ 0.93
PTPN6P29350 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PTPN6P29350 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.83■□□□□ 0.93
PTPN6P29350 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.83■□□□□ 0.93
PTPN6P29350 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
PTPN6P29350 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PTPN6P29350 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTPN6P29350 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTPN6P29350 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.82■□□□□ 0.92
PTPN6P29350 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PTPN6P29350 DUX4L4-201ENST00000566884 1269 ntBASIC20.82■□□□□ 0.92
PTPN6P29350 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
PTPN6P29350 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.82■□□□□ 0.92
PTPN6P29350 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.82■□□□□ 0.92
PTPN6P29350 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.82■□□□□ 0.92
PTPN6P29350 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PTPN6P29350 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PTPN6P29350 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.82■□□□□ 0.92
PTPN6P29350 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTPN6P29350 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTPN6P29350 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
PTPN6P29350 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms