Protein–RNA interactions for Protein: P19623

SRM, Spermidine synthase, humanhuman

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRMP19623 THA1P-201ENST00000590384 1145 ntBASIC19.17■□□□□ 0.66
SRMP19623 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SRMP19623 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.17■□□□□ 0.66
SRMP19623 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SRMP19623 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SRMP19623 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.16■□□□□ 0.66
SRMP19623 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SRMP19623 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.16■□□□□ 0.66
SRMP19623 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SRMP19623 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.16■□□□□ 0.66
SRMP19623 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SRMP19623 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SRMP19623 RARRES2P2-201ENST00000394842 485 ntBASIC19.16■□□□□ 0.66
SRMP19623 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SRMP19623 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.16■□□□□ 0.66
SRMP19623 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.16■□□□□ 0.66
SRMP19623 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SRMP19623 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SRMP19623 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SRMP19623 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.16■□□□□ 0.66
SRMP19623 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.15■□□□□ 0.66
SRMP19623 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SRMP19623 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SRMP19623 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.15■□□□□ 0.66
SRMP19623 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SRMP19623 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
SRMP19623 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SRMP19623 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.15■□□□□ 0.66
SRMP19623 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SRMP19623 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SRMP19623 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SRMP19623 IDNK-201ENST00000376417 511 ntTSL 5 BASIC19.15■□□□□ 0.66
SRMP19623 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SRMP19623 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SRMP19623 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SRMP19623 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC19.15■□□□□ 0.66
SRMP19623 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.15■□□□□ 0.66
SRMP19623 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.15■□□□□ 0.66
SRMP19623 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SRMP19623 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SRMP19623 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.14■□□□□ 0.66
SRMP19623 LINC01529-204ENST00000636474 1715 ntBASIC19.14■□□□□ 0.66
SRMP19623 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
SRMP19623 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.14■□□□□ 0.65
SRMP19623 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
SRMP19623 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC19.14■□□□□ 0.65
SRMP19623 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.14■□□□□ 0.65
SRMP19623 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SRMP19623 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SRMP19623 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
SRMP19623 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.14■□□□□ 0.65
SRMP19623 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SRMP19623 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SRMP19623 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SRMP19623 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC19.13■□□□□ 0.65
SRMP19623 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SRMP19623 DUX4L18-201ENST00000553347 1267 ntBASIC19.13■□□□□ 0.65
SRMP19623 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
SRMP19623 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SRMP19623 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.13■□□□□ 0.65
SRMP19623 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SRMP19623 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
SRMP19623 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SRMP19623 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.12■□□□□ 0.65
SRMP19623 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.12■□□□□ 0.65
SRMP19623 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.12■□□□□ 0.65
SRMP19623 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
SRMP19623 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SRMP19623 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SRMP19623 LINC01960-201ENST00000563759 1884 ntBASIC19.11■□□□□ 0.65
SRMP19623 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SRMP19623 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SRMP19623 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.11■□□□□ 0.65
SRMP19623 FP325331.1-202ENST00000623531 1380 ntBASIC19.11■□□□□ 0.65
SRMP19623 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SRMP19623 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
SRMP19623 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
SRMP19623 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SRMP19623 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.11■□□□□ 0.65
SRMP19623 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
SRMP19623 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
SRMP19623 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SRMP19623 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SRMP19623 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SRMP19623 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.1■□□□□ 0.65
SRMP19623 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SRMP19623 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SRMP19623 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SRMP19623 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC19.1■□□□□ 0.65
SRMP19623 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SRMP19623 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SRMP19623 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.1■□□□□ 0.65
SRMP19623 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
SRMP19623 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.09■□□□□ 0.65
SRMP19623 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SRMP19623 AC005229.4-201ENST00000610085 2198 ntBASIC19.09■□□□□ 0.65
SRMP19623 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SRMP19623 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SRMP19623 SLC25A24-204ENST00000569674 2357 ntBASIC19.09■□□□□ 0.65
SRMP19623 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 591.7 ms