Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
ATF3P18847 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
ATF3P18847 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
ATF3P18847 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC30.74■■■□□ 2.51
ATF3P18847 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC30.73■■■□□ 2.51
ATF3P18847 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
ATF3P18847 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
ATF3P18847 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC30.73■■■□□ 2.51
ATF3P18847 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC30.73■■■□□ 2.51
ATF3P18847 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
ATF3P18847 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC30.73■■■□□ 2.51
ATF3P18847 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC30.72■■■□□ 2.51
ATF3P18847 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC30.72■■■□□ 2.51
ATF3P18847 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC30.72■■■□□ 2.51
ATF3P18847 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC30.72■■■□□ 2.51
ATF3P18847 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC30.72■■■□□ 2.51
ATF3P18847 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
ATF3P18847 AC133041.1-202ENST00000642053 222 ntBASIC30.72■■■□□ 2.51
ATF3P18847 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
ATF3P18847 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
ATF3P18847 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC30.71■■■□□ 2.51
ATF3P18847 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
ATF3P18847 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC30.71■■■□□ 2.51
ATF3P18847 ARL16-209ENST00000573715 763 ntTSL 3 BASIC30.71■■■□□ 2.51
ATF3P18847 ARL16-211ENST00000576135 694 ntTSL 3 BASIC30.71■■■□□ 2.51
ATF3P18847 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC30.71■■■□□ 2.51
ATF3P18847 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC30.71■■■□□ 2.51
ATF3P18847 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
ATF3P18847 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC30.71■■■□□ 2.51
ATF3P18847 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
ATF3P18847 DUSP8P4-201ENST00000399538 1761 ntBASIC30.7■■■□□ 2.51
ATF3P18847 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
ATF3P18847 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC30.7■■■□□ 2.51
ATF3P18847 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC30.7■■■□□ 2.51
ATF3P18847 AC068587.7-201ENST00000641602 218 ntBASIC30.7■■■□□ 2.51
ATF3P18847 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
ATF3P18847 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
ATF3P18847 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
ATF3P18847 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
ATF3P18847 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC30.69■■■□□ 2.5
ATF3P18847 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
ATF3P18847 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC30.69■■■□□ 2.5
ATF3P18847 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC30.69■■■□□ 2.5
ATF3P18847 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC30.69■■■□□ 2.5
ATF3P18847 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC30.69■■■□□ 2.5
ATF3P18847 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
ATF3P18847 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
ATF3P18847 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC30.68■■■□□ 2.5
ATF3P18847 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
ATF3P18847 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
ATF3P18847 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC30.67■■■□□ 2.5
ATF3P18847 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
ATF3P18847 AC073210.2-201ENST00000430369 194 ntBASIC30.67■■■□□ 2.5
ATF3P18847 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC30.67■■■□□ 2.5
ATF3P18847 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC30.67■■■□□ 2.5
ATF3P18847 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC30.67■■■□□ 2.5
ATF3P18847 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC30.67■■■□□ 2.5
ATF3P18847 AC087239.1-201ENST00000622671 572 ntBASIC30.67■■■□□ 2.5
ATF3P18847 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
ATF3P18847 AC104187.1-201ENST00000607510 612 ntBASIC30.66■■■□□ 2.5
ATF3P18847 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC30.66■■■□□ 2.5
ATF3P18847 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC30.66■■■□□ 2.5
ATF3P18847 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
ATF3P18847 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC30.65■■■□□ 2.5
ATF3P18847 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC30.65■■■□□ 2.5
ATF3P18847 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
ATF3P18847 EI24-211ENST00000534546 1544 ntTSL 2 BASIC30.65■■■□□ 2.5
ATF3P18847 PARP1-202ENST00000366792 553 ntTSL 3 BASIC30.65■■■□□ 2.5
ATF3P18847 POU5F1P3-201ENST00000428824 1078 ntBASIC30.65■■■□□ 2.5
ATF3P18847 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC30.65■■■□□ 2.5
ATF3P18847 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
ATF3P18847 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC30.65■■■□□ 2.5
ATF3P18847 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
ATF3P18847 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
ATF3P18847 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC30.64■■■□□ 2.5
ATF3P18847 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
ATF3P18847 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
ATF3P18847 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC30.64■■■□□ 2.5
ATF3P18847 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC30.64■■■□□ 2.5
ATF3P18847 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC30.64■■■□□ 2.5
ATF3P18847 ITM2C-210ENST00000620962 501 ntBASIC30.64■■■□□ 2.5
ATF3P18847 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
ATF3P18847 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC30.62■■■□□ 2.49
ATF3P18847 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC30.62■■■□□ 2.49
ATF3P18847 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC30.62■■■□□ 2.49
ATF3P18847 AC010141.3-201ENST00000456659 717 ntBASIC30.62■■■□□ 2.49
ATF3P18847 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC30.62■■■□□ 2.49
ATF3P18847 UBE2DNL-204ENST00000602536 740 ntBASIC30.62■■■□□ 2.49
ATF3P18847 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC30.62■■■□□ 2.49
ATF3P18847 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC30.62■■■□□ 2.49
ATF3P18847 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC30.61■■■□□ 2.49
ATF3P18847 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
ATF3P18847 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC30.61■■■□□ 2.49
ATF3P18847 KRT18P29-201ENST00000397031 1267 ntBASIC30.61■■■□□ 2.49
ATF3P18847 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC30.61■■■□□ 2.49
ATF3P18847 AF201337.1-201ENST00000520239 748 ntBASIC30.61■■■□□ 2.49
ATF3P18847 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC30.61■■■□□ 2.49
ATF3P18847 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
ATF3P18847 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
ATF3P18847 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms