Protein–RNA interactions for Protein: P16649

TUP1, General transcriptional corepressor TUP1, yeastyeast

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TUP1P16649 YGR016WYGR016W 573 nt4.8□□□□□ -1.64
TUP1P16649 YAL069WYAL069W 315 nt4.8□□□□□ -1.64
TUP1P16649 ERD2YBL040C 660 nt4.8□□□□□ -1.64
TUP1P16649 YBR016WYBR016W 387 nt4.8□□□□□ -1.64
TUP1P16649 YPR071WYPR071W 636 nt4.8□□□□□ -1.64
TUP1P16649 ARA1YBR149W 1035 nt4.8□□□□□ -1.64
TUP1P16649 PDR15YDR406W 4590 nt4.8□□□□□ -1.64
TUP1P16649 IMA3YIL172C 1770 nt4.8□□□□□ -1.64
TUP1P16649 IMA4YJL221C 1770 nt4.8□□□□□ -1.64
TUP1P16649 EGT2YNL327W 3126 nt4.8□□□□□ -1.64
TUP1P16649 CTT1YGR088W 1689 nt4.8□□□□□ -1.64
TUP1P16649 SNF3YDL194W 2655 nt4.79□□□□□ -1.64
TUP1P16649 AFT1YGL071W 2073 nt4.79□□□□□ -1.64
TUP1P16649 CPR4YCR069W 957 nt4.79□□□□□ -1.64
TUP1P16649 KIN28YDL108W 921 nt4.79□□□□□ -1.64
TUP1P16649 RDI1YDL135C 609 nt4.79□□□□□ -1.64
TUP1P16649 HTD2YHR067W 843 nt4.79□□□□□ -1.64
TUP1P16649 UPS2YLR168C 693 nt4.79□□□□□ -1.64
TUP1P16649 YBL096CYBL096C 309 nt4.79□□□□□ -1.64
TUP1P16649 PNO1YOR145C 825 nt4.79□□□□□ -1.64
TUP1P16649 PLP2YOR281C 861 nt4.79□□□□□ -1.64
TUP1P16649 EAR1YMR171C 1653 nt4.79□□□□□ -1.64
TUP1P16649 MET4YNL103W 2019 nt4.79□□□□□ -1.64
TUP1P16649 TIF4632YGL049C 2745 nt4.78□□□□□ -1.64
TUP1P16649 snR7-LsnR7-L 214 nt4.78□□□□□ -1.64
TUP1P16649 SPT3YDR392W 1014 nt4.78□□□□□ -1.64
TUP1P16649 tK(CUU)CtK(CUU)C 73 nt4.78□□□□□ -1.64
TUP1P16649 tK(CUU)D1tK(CUU)D1 73 nt4.78□□□□□ -1.64
TUP1P16649 tK(CUU)D2tK(CUU)D2 73 nt4.78□□□□□ -1.64
TUP1P16649 tK(CUU)E1tK(CUU)E1 73 nt4.78□□□□□ -1.64
TUP1P16649 tK(CUU)E2tK(CUU)E2 73 nt4.78□□□□□ -1.64
TUP1P16649 tK(CUU)FtK(CUU)F 73 nt4.78□□□□□ -1.64
TUP1P16649 tK(CUU)G1tK(CUU)G1 73 nt4.78□□□□□ -1.64
TUP1P16649 tK(CUU)G2tK(CUU)G2 73 nt4.78□□□□□ -1.64
TUP1P16649 tK(CUU)G3tK(CUU)G3 73 nt4.78□□□□□ -1.64
TUP1P16649 tK(CUU)ItK(CUU)I 73 nt4.78□□□□□ -1.64
TUP1P16649 tK(CUU)JtK(CUU)J 73 nt4.78□□□□□ -1.64
TUP1P16649 tK(CUU)KtK(CUU)K 73 nt4.78□□□□□ -1.64
TUP1P16649 tK(CUU)MtK(CUU)M 73 nt4.78□□□□□ -1.64
TUP1P16649 tK(CUU)PtK(CUU)P 73 nt4.78□□□□□ -1.64
TUP1P16649 YFR057WYFR057W 456 nt4.78□□□□□ -1.64
TUP1P16649 YIL021C-AYIL021C-A 270 nt4.78□□□□□ -1.64
TUP1P16649 LSO1YJR005C-A 282 nt4.78□□□□□ -1.64
TUP1P16649 CYC2YOR037W 1101 nt4.78□□□□□ -1.64
TUP1P16649 RPB8YOR224C 441 nt4.78□□□□□ -1.64
TUP1P16649 ARO4YBR249C 1113 nt4.78□□□□□ -1.64
TUP1P16649 NUP2YLR335W 2163 nt4.78□□□□□ -1.64
TUP1P16649 DNF2YDR093W 4839 nt4.77□□□□□ -1.65
TUP1P16649 SMF1YOL122C 1728 nt4.77□□□□□ -1.65
TUP1P16649 TRM44YPL030W 1704 nt4.77□□□□□ -1.65
TUP1P16649 PER1YCR044C 1074 nt4.77□□□□□ -1.65
TUP1P16649 YDR391CYDR391C 699 nt4.77□□□□□ -1.65
TUP1P16649 YHL034W-AYHL034W-A 462 nt4.77□□□□□ -1.65
TUP1P16649 UBI4YLL039C 1146 nt4.77□□□□□ -1.65
TUP1P16649 SEC72YLR292C 582 nt4.77□□□□□ -1.65
TUP1P16649 YAP7YOL028C 738 nt4.77□□□□□ -1.65
TUP1P16649 UFE1YOR075W 1041 nt4.77□□□□□ -1.65
TUP1P16649 KTR7YIL085C 1554 nt4.77□□□□□ -1.65
TUP1P16649 YJR061WYJR061W 2808 nt4.77□□□□□ -1.65
TUP1P16649 OLE1YGL055W 1533 nt4.77□□□□□ -1.65
TUP1P16649 NOP58YOR310C 1536 nt4.77□□□□□ -1.65
TUP1P16649 POL31YJR006W 1464 nt4.76□□□□□ -1.65
TUP1P16649 YEL053W-AYEL053W-A 348 nt4.76□□□□□ -1.65
TUP1P16649 KIC1YHR102W 3243 nt4.76□□□□□ -1.65
TUP1P16649 SDS3YIL084C 984 nt4.76□□□□□ -1.65
TUP1P16649 ECM23YPL021W 564 nt4.76□□□□□ -1.65
TUP1P16649 CBP3YPL215W 1008 nt4.76□□□□□ -1.65
TUP1P16649 MCM4YPR019W 2802 nt4.76□□□□□ -1.65
TUP1P16649 MSE1YOL033W 1611 nt4.75□□□□□ -1.65
TUP1P16649 EST3YIL009C-A 546 nt4.75□□□□□ -1.65
TUP1P16649 GAT3YLR013W 426 nt4.75□□□□□ -1.65
TUP1P16649 RIF2YLR453C 1188 nt4.75□□□□□ -1.65
TUP1P16649 VPS20YMR077C 666 nt4.75□□□□□ -1.65
TUP1P16649 YOL106WYOL106W 354 nt4.75□□□□□ -1.65
TUP1P16649 VPS21YOR089C 633 nt4.75□□□□□ -1.65
TUP1P16649 GRX5YPL059W 453 nt4.75□□□□□ -1.65
TUP1P16649 REI1YBR267W 1182 nt4.75□□□□□ -1.65
TUP1P16649 APM3YBR288C 1452 nt4.75□□□□□ -1.65
TUP1P16649 BLM10YFL007W 6432 nt4.74□□□□□ -1.65
TUP1P16649 HRK1YOR267C 2280 nt4.74□□□□□ -1.65
TUP1P16649 OCA4YCR095C 1089 nt4.74□□□□□ -1.65
TUP1P16649 KRE28YDR532C 1158 nt4.74□□□□□ -1.65
TUP1P16649 DCV1YFR012W 609 nt4.74□□□□□ -1.65
TUP1P16649 GTT1YIR038C 705 nt4.74□□□□□ -1.65
TUP1P16649 PSF2YJL072C 642 nt4.74□□□□□ -1.65
TUP1P16649 RFA3YJL173C 369 nt4.74□□□□□ -1.65
TUP1P16649 YUH1YJR099W 711 nt4.74□□□□□ -1.65
TUP1P16649 IRC25YLR021W 540 nt4.74□□□□□ -1.65
TUP1P16649 BOS1YLR078C 735 nt4.74□□□□□ -1.65
TUP1P16649 USB1YLR132C 873 nt4.74□□□□□ -1.65
TUP1P16649 ATG34YOL083W 1239 nt4.74□□□□□ -1.65
TUP1P16649 ICS2YBR157C 768 nt4.74□□□□□ -1.65
TUP1P16649 YEH2YLR020C 1617 nt4.74□□□□□ -1.65
TUP1P16649 MMT1YMR177W 1533 nt4.73□□□□□ -1.65
TUP1P16649 RNA15YGL044C 891 nt4.73□□□□□ -1.65
TUP1P16649 YGR122WYGR122W 1209 nt4.73□□□□□ -1.65
TUP1P16649 GSP1YLR293C 660 nt4.73□□□□□ -1.65
TUP1P16649 YBR139WYBR139W 1527 nt4.72□□□□□ -1.65
TUP1P16649 CYM1YDR430C 2970 nt4.72□□□□□ -1.65
TUP1P16649 YDR056CYDR056C 618 nt4.72□□□□□ -1.65
Retrieved 100 of 7,029 protein–RNA pairs in 16.5 ms