Protein–RNA interactions for Protein: P11279

LAMP1, Lysosome-associated membrane glycoprotein 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1P11279 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
LAMP1P11279 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
LAMP1P11279 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LAMP1P11279 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.85■□□□□ 0.93
LAMP1P11279 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
LAMP1P11279 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LAMP1P11279 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
LAMP1P11279 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LAMP1P11279 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LAMP1P11279 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LAMP1P11279 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LAMP1P11279 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
LAMP1P11279 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LAMP1P11279 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
LAMP1P11279 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LAMP1P11279 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.84■□□□□ 0.93
LAMP1P11279 MIR6724-1-201ENST00000616420 92 ntBASIC20.84■□□□□ 0.93
LAMP1P11279 MIR6724-2-201ENST00000616483 92 ntBASIC20.84■□□□□ 0.93
LAMP1P11279 MIR6724-4-201ENST00000617390 92 ntBASIC20.84■□□□□ 0.93
LAMP1P11279 MIR6724-3-201ENST00000622482 92 ntBASIC20.84■□□□□ 0.93
LAMP1P11279 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LAMP1P11279 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
LAMP1P11279 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LAMP1P11279 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LAMP1P11279 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.83■□□□□ 0.93
LAMP1P11279 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LAMP1P11279 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.83■□□□□ 0.92
LAMP1P11279 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
LAMP1P11279 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LAMP1P11279 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LAMP1P11279 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LAMP1P11279 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LAMP1P11279 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.82■□□□□ 0.92
LAMP1P11279 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LAMP1P11279 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.82■□□□□ 0.92
LAMP1P11279 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.82■□□□□ 0.92
LAMP1P11279 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LAMP1P11279 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.82■□□□□ 0.92
LAMP1P11279 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.82■□□□□ 0.92
LAMP1P11279 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LAMP1P11279 C11orf96-202ENST00000528572 1834 ntBASIC20.82■□□□□ 0.92
LAMP1P11279 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
LAMP1P11279 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.82■□□□□ 0.92
LAMP1P11279 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LAMP1P11279 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LAMP1P11279 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.81■□□□□ 0.92
LAMP1P11279 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LAMP1P11279 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
LAMP1P11279 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LAMP1P11279 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LAMP1P11279 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
LAMP1P11279 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LAMP1P11279 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.81■□□□□ 0.92
LAMP1P11279 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.81■□□□□ 0.92
LAMP1P11279 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LAMP1P11279 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
LAMP1P11279 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LAMP1P11279 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LAMP1P11279 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LAMP1P11279 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
LAMP1P11279 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LAMP1P11279 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
LAMP1P11279 AC137767.1-201ENST00000602918 1920 ntBASIC20.8■□□□□ 0.92
LAMP1P11279 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
LAMP1P11279 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LAMP1P11279 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LAMP1P11279 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LAMP1P11279 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.8■□□□□ 0.92
LAMP1P11279 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
LAMP1P11279 AL035685.1-201ENST00000636663 812 ntBASIC20.8■□□□□ 0.92
LAMP1P11279 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LAMP1P11279 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.8■□□□□ 0.92
LAMP1P11279 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.8■□□□□ 0.92
LAMP1P11279 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LAMP1P11279 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LAMP1P11279 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
LAMP1P11279 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.8■□□□□ 0.92
LAMP1P11279 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.8■□□□□ 0.92
LAMP1P11279 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LAMP1P11279 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.79■□□□□ 0.92
LAMP1P11279 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
LAMP1P11279 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
LAMP1P11279 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
LAMP1P11279 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LAMP1P11279 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LAMP1P11279 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
LAMP1P11279 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.79■□□□□ 0.92
LAMP1P11279 AL117332.1-201ENST00000622628 974 ntBASIC20.79■□□□□ 0.92
LAMP1P11279 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LAMP1P11279 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.79■□□□□ 0.92
LAMP1P11279 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
LAMP1P11279 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.79■□□□□ 0.92
LAMP1P11279 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.78■□□□□ 0.92
LAMP1P11279 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LAMP1P11279 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LAMP1P11279 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
LAMP1P11279 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LAMP1P11279 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LAMP1P11279 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.78■□□□□ 0.92
LAMP1P11279 KRT16P3-201ENST00000439127 1283 ntBASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms