Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FREM3P0C091 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FREM3P0C091 DUX4L4-201ENST00000566884 1269 ntBASIC20.03■□□□□ 0.8
FREM3P0C091 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FREM3P0C091 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FREM3P0C091 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FREM3P0C091 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.03■□□□□ 0.8
FREM3P0C091 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
FREM3P0C091 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FREM3P0C091 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.03■□□□□ 0.8
FREM3P0C091 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
FREM3P0C091 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
FREM3P0C091 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
FREM3P0C091 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
FREM3P0C091 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
FREM3P0C091 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
FREM3P0C091 MIR572-201ENST00000384983 95 ntBASIC20.02■□□□□ 0.8
FREM3P0C091 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.02■□□□□ 0.8
FREM3P0C091 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
FREM3P0C091 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
FREM3P0C091 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
FREM3P0C091 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
FREM3P0C091 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
FREM3P0C091 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
FREM3P0C091 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
FREM3P0C091 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.02■□□□□ 0.79
FREM3P0C091 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.02■□□□□ 0.79
FREM3P0C091 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
FREM3P0C091 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
FREM3P0C091 AL353803.4-201ENST00000565882 1934 ntBASIC20.01■□□□□ 0.79
FREM3P0C091 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.01■□□□□ 0.79
FREM3P0C091 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
FREM3P0C091 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.01■□□□□ 0.79
FREM3P0C091 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
FREM3P0C091 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
FREM3P0C091 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.01■□□□□ 0.79
FREM3P0C091 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20■□□□□ 0.79
FREM3P0C091 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20■□□□□ 0.79
FREM3P0C091 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20■□□□□ 0.79
FREM3P0C091 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20■□□□□ 0.79
FREM3P0C091 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20■□□□□ 0.79
FREM3P0C091 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
FREM3P0C091 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
FREM3P0C091 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
FREM3P0C091 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20■□□□□ 0.79
FREM3P0C091 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
FREM3P0C091 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20■□□□□ 0.79
FREM3P0C091 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20■□□□□ 0.79
FREM3P0C091 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
FREM3P0C091 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20■□□□□ 0.79
FREM3P0C091 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20■□□□□ 0.79
FREM3P0C091 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20■□□□□ 0.79
FREM3P0C091 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
FREM3P0C091 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20■□□□□ 0.79
FREM3P0C091 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20■□□□□ 0.79
FREM3P0C091 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20■□□□□ 0.79
FREM3P0C091 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
FREM3P0C091 TSPY26P-201ENST00000476365 1326 ntBASIC19.99■□□□□ 0.79
FREM3P0C091 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
FREM3P0C091 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.99■□□□□ 0.79
FREM3P0C091 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
FREM3P0C091 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.99■□□□□ 0.79
FREM3P0C091 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.98■□□□□ 0.79
FREM3P0C091 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
FREM3P0C091 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
FREM3P0C091 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.98■□□□□ 0.79
FREM3P0C091 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
FREM3P0C091 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
FREM3P0C091 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.98■□□□□ 0.79
FREM3P0C091 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
FREM3P0C091 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.98■□□□□ 0.79
FREM3P0C091 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.97■□□□□ 0.79
FREM3P0C091 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.97■□□□□ 0.79
FREM3P0C091 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.97■□□□□ 0.79
FREM3P0C091 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
FREM3P0C091 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
FREM3P0C091 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.97■□□□□ 0.79
FREM3P0C091 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
FREM3P0C091 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.97■□□□□ 0.79
FREM3P0C091 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
FREM3P0C091 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
FREM3P0C091 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
FREM3P0C091 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
FREM3P0C091 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
FREM3P0C091 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.97■□□□□ 0.79
FREM3P0C091 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
FREM3P0C091 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
FREM3P0C091 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.97■□□□□ 0.79
FREM3P0C091 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
FREM3P0C091 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
FREM3P0C091 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
FREM3P0C091 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.96■□□□□ 0.79
FREM3P0C091 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.96■□□□□ 0.79
FREM3P0C091 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
FREM3P0C091 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
FREM3P0C091 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.96■□□□□ 0.79
FREM3P0C091 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
FREM3P0C091 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
FREM3P0C091 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.96■□□□□ 0.79
FREM3P0C091 AC027612.3-201ENST00000413684 1047 ntBASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms