Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC28.29■■■□□ 2.12
SNRPA1P09661 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC28.29■■■□□ 2.12
SNRPA1P09661 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
SNRPA1P09661 TPRG1LP1-201ENST00000598702 760 ntBASIC28.29■■■□□ 2.12
SNRPA1P09661 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC28.28■■■□□ 2.12
SNRPA1P09661 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
SNRPA1P09661 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
SNRPA1P09661 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
SNRPA1P09661 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
SNRPA1P09661 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
SNRPA1P09661 GXYLT1P2-201ENST00000433312 1230 ntBASIC28.28■■■□□ 2.12
SNRPA1P09661 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC28.28■■■□□ 2.12
SNRPA1P09661 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
SNRPA1P09661 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
SNRPA1P09661 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
SNRPA1P09661 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC28.27■■■□□ 2.12
SNRPA1P09661 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
SNRPA1P09661 AC010141.3-201ENST00000456659 717 ntBASIC28.27■■■□□ 2.12
SNRPA1P09661 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC28.27■■■□□ 2.12
SNRPA1P09661 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC28.27■■■□□ 2.12
SNRPA1P09661 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
SNRPA1P09661 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC28.26■■■□□ 2.12
SNRPA1P09661 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
SNRPA1P09661 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC28.26■■■□□ 2.12
SNRPA1P09661 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC28.26■■■□□ 2.11
SNRPA1P09661 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
SNRPA1P09661 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
SNRPA1P09661 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
SNRPA1P09661 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC28.26■■■□□ 2.11
SNRPA1P09661 AC090192.1-201ENST00000517740 490 ntBASIC28.26■■■□□ 2.11
SNRPA1P09661 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC28.26■■■□□ 2.11
SNRPA1P09661 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
SNRPA1P09661 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC28.25■■■□□ 2.11
SNRPA1P09661 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
SNRPA1P09661 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
SNRPA1P09661 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
SNRPA1P09661 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC28.25■■■□□ 2.11
SNRPA1P09661 AC087239.1-201ENST00000622671 572 ntBASIC28.25■■■□□ 2.11
SNRPA1P09661 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC28.25■■■□□ 2.11
SNRPA1P09661 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
SNRPA1P09661 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
SNRPA1P09661 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
SNRPA1P09661 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC28.24■■■□□ 2.11
SNRPA1P09661 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC28.24■■■□□ 2.11
SNRPA1P09661 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
SNRPA1P09661 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC28.24■■■□□ 2.11
SNRPA1P09661 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC28.24■■■□□ 2.11
SNRPA1P09661 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC28.24■■■□□ 2.11
SNRPA1P09661 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC28.24■■■□□ 2.11
SNRPA1P09661 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
SNRPA1P09661 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
SNRPA1P09661 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC28.24■■■□□ 2.11
SNRPA1P09661 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC28.24■■■□□ 2.11
SNRPA1P09661 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC28.24■■■□□ 2.11
SNRPA1P09661 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
SNRPA1P09661 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC28.23■■■□□ 2.11
SNRPA1P09661 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC28.23■■■□□ 2.11
SNRPA1P09661 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
SNRPA1P09661 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC28.23■■■□□ 2.11
SNRPA1P09661 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC28.23■■■□□ 2.11
SNRPA1P09661 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
SNRPA1P09661 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC28.23■■■□□ 2.11
SNRPA1P09661 SMUG1P1-201ENST00000590640 811 ntBASIC28.23■■■□□ 2.11
SNRPA1P09661 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC28.23■■■□□ 2.11
SNRPA1P09661 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC28.23■■■□□ 2.11
SNRPA1P09661 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
SNRPA1P09661 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC28.23■■■□□ 2.11
SNRPA1P09661 BX005040.4-201ENST00000637145 1518 ntBASIC28.23■■■□□ 2.11
SNRPA1P09661 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC28.22■■■□□ 2.11
SNRPA1P09661 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC28.22■■■□□ 2.11
SNRPA1P09661 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC28.22■■■□□ 2.11
SNRPA1P09661 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
SNRPA1P09661 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC28.22■■■□□ 2.11
SNRPA1P09661 AC004911.1-201ENST00000416316 871 ntBASIC28.22■■■□□ 2.11
SNRPA1P09661 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
SNRPA1P09661 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC28.22■■■□□ 2.11
SNRPA1P09661 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
SNRPA1P09661 KRT18P61-201ENST00000585825 1298 ntBASIC28.21■■■□□ 2.11
SNRPA1P09661 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC28.21■■■□□ 2.11
SNRPA1P09661 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
SNRPA1P09661 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
SNRPA1P09661 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC28.2■■■□□ 2.11
SNRPA1P09661 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
SNRPA1P09661 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
SNRPA1P09661 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC28.2■■■□□ 2.1
SNRPA1P09661 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC28.2■■■□□ 2.1
SNRPA1P09661 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC28.2■■■□□ 2.1
SNRPA1P09661 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC28.2■■■□□ 2.1
SNRPA1P09661 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC28.2■■■□□ 2.1
SNRPA1P09661 USP45-205ENST00000472914 1617 ntTSL 5 BASIC28.2■■■□□ 2.1
SNRPA1P09661 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC28.2■■■□□ 2.1
SNRPA1P09661 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
SNRPA1P09661 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
SNRPA1P09661 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
SNRPA1P09661 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC28.19■■■□□ 2.1
SNRPA1P09661 OXCT2P1-201ENST00000447263 1535 ntBASIC28.19■■■□□ 2.1
SNRPA1P09661 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
SNRPA1P09661 ME3-201ENST00000323418 1068 ntTSL 5 BASIC28.19■■■□□ 2.1
SNRPA1P09661 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
SNRPA1P09661 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC28.19■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms