Protein–RNA interactions for Protein: P08F94

PKHD1, Fibrocystin, humanhuman

Predictions only

Length 4,074 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1P08F94 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PKHD1P08F94 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC14.33□□□□□ -0.12
PKHD1P08F94 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
PKHD1P08F94 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC14.33□□□□□ -0.12
PKHD1P08F94 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC14.33□□□□□ -0.12
PKHD1P08F94 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PKHD1P08F94 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PKHD1P08F94 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
PKHD1P08F94 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PKHD1P08F94 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC14.33□□□□□ -0.12
PKHD1P08F94 KRT18P29-201ENST00000397031 1267 ntBASIC14.33□□□□□ -0.12
PKHD1P08F94 CPT2-209ENST00000636935 803 ntTSL 5 BASIC14.33□□□□□ -0.12
PKHD1P08F94 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PKHD1P08F94 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
PKHD1P08F94 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PKHD1P08F94 FAM201B-201ENST00000458407 597 ntBASIC14.32□□□□□ -0.12
PKHD1P08F94 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC14.32□□□□□ -0.12
PKHD1P08F94 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC14.32□□□□□ -0.12
PKHD1P08F94 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
PKHD1P08F94 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PKHD1P08F94 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PKHD1P08F94 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC14.32□□□□□ -0.12
PKHD1P08F94 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC14.32□□□□□ -0.12
PKHD1P08F94 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PKHD1P08F94 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
PKHD1P08F94 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC14.32□□□□□ -0.12
PKHD1P08F94 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC14.32□□□□□ -0.12
PKHD1P08F94 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PKHD1P08F94 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PKHD1P08F94 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PKHD1P08F94 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC14.32□□□□□ -0.12
PKHD1P08F94 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PKHD1P08F94 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PKHD1P08F94 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC14.31□□□□□ -0.12
PKHD1P08F94 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC14.31□□□□□ -0.12
PKHD1P08F94 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PKHD1P08F94 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PKHD1P08F94 AF201337.1-201ENST00000520239 748 ntBASIC14.31□□□□□ -0.12
PKHD1P08F94 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC14.31□□□□□ -0.12
PKHD1P08F94 AC083880.1-201ENST00000608266 535 ntBASIC14.31□□□□□ -0.12
PKHD1P08F94 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC14.31□□□□□ -0.12
PKHD1P08F94 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC14.31□□□□□ -0.12
PKHD1P08F94 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
PKHD1P08F94 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PKHD1P08F94 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PKHD1P08F94 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PKHD1P08F94 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC14.31□□□□□ -0.12
PKHD1P08F94 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PKHD1P08F94 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
PKHD1P08F94 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC14.31□□□□□ -0.12
PKHD1P08F94 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC14.31□□□□□ -0.12
PKHD1P08F94 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
PKHD1P08F94 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PKHD1P08F94 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
PKHD1P08F94 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
PKHD1P08F94 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PKHD1P08F94 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC14.3□□□□□ -0.12
PKHD1P08F94 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC14.3□□□□□ -0.12
PKHD1P08F94 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC14.3□□□□□ -0.12
PKHD1P08F94 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PKHD1P08F94 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PKHD1P08F94 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PKHD1P08F94 STX4-202ENST00000394998 1498 ntTSL 2 BASIC14.3□□□□□ -0.12
PKHD1P08F94 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PKHD1P08F94 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PKHD1P08F94 AC105036.2-201ENST00000569468 176 ntBASIC14.3□□□□□ -0.12
PKHD1P08F94 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC14.3□□□□□ -0.12
PKHD1P08F94 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PKHD1P08F94 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PKHD1P08F94 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC14.29□□□□□ -0.12
PKHD1P08F94 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PKHD1P08F94 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC14.29□□□□□ -0.12
PKHD1P08F94 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC14.29□□□□□ -0.12
PKHD1P08F94 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
PKHD1P08F94 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PKHD1P08F94 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PKHD1P08F94 UQCRFS1P1-201ENST00000435169 820 ntBASIC14.29□□□□□ -0.12
PKHD1P08F94 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PKHD1P08F94 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PKHD1P08F94 AC008550.1-201ENST00000511500 884 ntBASIC14.29□□□□□ -0.12
PKHD1P08F94 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PKHD1P08F94 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PKHD1P08F94 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC14.29□□□□□ -0.12
PKHD1P08F94 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
PKHD1P08F94 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC14.29□□□□□ -0.12
PKHD1P08F94 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC14.29□□□□□ -0.12
PKHD1P08F94 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PKHD1P08F94 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PKHD1P08F94 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC14.29□□□□□ -0.12
PKHD1P08F94 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PKHD1P08F94 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC14.28□□□□□ -0.12
PKHD1P08F94 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
PKHD1P08F94 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PKHD1P08F94 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
PKHD1P08F94 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
PKHD1P08F94 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PKHD1P08F94 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
PKHD1P08F94 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
PKHD1P08F94 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
PKHD1P08F94 APTR-203ENST00000430801 583 ntTSL 5 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms