Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.24■□□□□ 0.99
KRT6AP02538 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.24■□□□□ 0.99
KRT6AP02538 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
KRT6AP02538 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
KRT6AP02538 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.24■□□□□ 0.99
KRT6AP02538 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.24■□□□□ 0.99
KRT6AP02538 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.24■□□□□ 0.99
KRT6AP02538 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.24■□□□□ 0.99
KRT6AP02538 LINC00565-201ENST00000562710 2331 ntBASIC21.24■□□□□ 0.99
KRT6AP02538 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
KRT6AP02538 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
KRT6AP02538 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.24■□□□□ 0.99
KRT6AP02538 LINC01960-201ENST00000563759 1884 ntBASIC21.24■□□□□ 0.99
KRT6AP02538 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
KRT6AP02538 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
KRT6AP02538 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
KRT6AP02538 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
KRT6AP02538 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.23■□□□□ 0.99
KRT6AP02538 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
KRT6AP02538 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.23■□□□□ 0.99
KRT6AP02538 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.23■□□□□ 0.99
KRT6AP02538 AL117332.1-201ENST00000622628 974 ntBASIC21.23■□□□□ 0.99
KRT6AP02538 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
KRT6AP02538 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
KRT6AP02538 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
KRT6AP02538 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
KRT6AP02538 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
KRT6AP02538 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
KRT6AP02538 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
KRT6AP02538 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
KRT6AP02538 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.22■□□□□ 0.99
KRT6AP02538 AC092053.2-201ENST00000640557 1818 ntBASIC21.22■□□□□ 0.99
KRT6AP02538 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
KRT6AP02538 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
KRT6AP02538 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
KRT6AP02538 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.22■□□□□ 0.99
KRT6AP02538 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
KRT6AP02538 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
KRT6AP02538 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.22■□□□□ 0.99
KRT6AP02538 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
KRT6AP02538 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
KRT6AP02538 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
KRT6AP02538 KRT16P3-201ENST00000439127 1283 ntBASIC21.22■□□□□ 0.99
KRT6AP02538 AC139530.1-201ENST00000575312 1977 ntBASIC21.22■□□□□ 0.99
KRT6AP02538 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
KRT6AP02538 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
KRT6AP02538 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.22■□□□□ 0.99
KRT6AP02538 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
KRT6AP02538 AC004687.1-201ENST00000579003 1625 ntBASIC21.22■□□□□ 0.99
KRT6AP02538 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
KRT6AP02538 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.21■□□□□ 0.99
KRT6AP02538 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
KRT6AP02538 AC080038.3-201ENST00000623346 1952 ntBASIC21.21■□□□□ 0.99
KRT6AP02538 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.21■□□□□ 0.99
KRT6AP02538 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
KRT6AP02538 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
KRT6AP02538 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
KRT6AP02538 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
KRT6AP02538 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
KRT6AP02538 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
KRT6AP02538 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.99
KRT6AP02538 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
KRT6AP02538 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
KRT6AP02538 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
KRT6AP02538 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
KRT6AP02538 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.2■□□□□ 0.98
KRT6AP02538 AL035685.1-201ENST00000636663 812 ntBASIC21.2■□□□□ 0.98
KRT6AP02538 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
KRT6AP02538 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
KRT6AP02538 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
KRT6AP02538 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
KRT6AP02538 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.19■□□□□ 0.98
KRT6AP02538 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
KRT6AP02538 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KRT6AP02538 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
KRT6AP02538 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.19■□□□□ 0.98
KRT6AP02538 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
KRT6AP02538 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.19■□□□□ 0.98
KRT6AP02538 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.19■□□□□ 0.98
KRT6AP02538 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
KRT6AP02538 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
KRT6AP02538 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KRT6AP02538 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KRT6AP02538 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
KRT6AP02538 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
KRT6AP02538 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
KRT6AP02538 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
KRT6AP02538 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
KRT6AP02538 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
KRT6AP02538 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
KRT6AP02538 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.18■□□□□ 0.98
KRT6AP02538 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.18■□□□□ 0.98
KRT6AP02538 AC241377.3-202ENST00000626088 1088 ntBASIC21.18■□□□□ 0.98
KRT6AP02538 AC241585.3-202ENST00000628937 1088 ntBASIC21.18■□□□□ 0.98
KRT6AP02538 AC245100.8-202ENST00000629247 1058 ntBASIC21.18■□□□□ 0.98
KRT6AP02538 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.18■□□□□ 0.98
KRT6AP02538 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.18■□□□□ 0.98
KRT6AP02538 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
KRT6AP02538 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
KRT6AP02538 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms