Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HLA-AP01891 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC18.49■□□□□ 0.55
HLA-AP01891 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-AP01891 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-AP01891 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.49■□□□□ 0.55
HLA-AP01891 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
HLA-AP01891 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.49■□□□□ 0.55
HLA-AP01891 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-AP01891 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-AP01891 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.49■□□□□ 0.55
HLA-AP01891 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.49■□□□□ 0.55
HLA-AP01891 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
HLA-AP01891 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.48■□□□□ 0.55
HLA-AP01891 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-AP01891 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
HLA-AP01891 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
HLA-AP01891 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-AP01891 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
HLA-AP01891 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-AP01891 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.48■□□□□ 0.55
HLA-AP01891 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-AP01891 KRT18P60-201ENST00000312876 1297 ntBASIC18.48■□□□□ 0.55
HLA-AP01891 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC18.48■□□□□ 0.55
HLA-AP01891 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-AP01891 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-AP01891 STK32C-205ENST00000456004 607 ntTSL 2 BASIC18.48■□□□□ 0.55
HLA-AP01891 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC18.48■□□□□ 0.55
HLA-AP01891 AL353803.4-201ENST00000565882 1934 ntBASIC18.48■□□□□ 0.55
HLA-AP01891 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-AP01891 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
HLA-AP01891 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-AP01891 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-AP01891 AC005229.4-201ENST00000610085 2198 ntBASIC18.48■□□□□ 0.55
HLA-AP01891 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
HLA-AP01891 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
HLA-AP01891 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-AP01891 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-AP01891 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-AP01891 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-AP01891 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-AP01891 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-AP01891 AC010542.4-201ENST00000563151 1910 ntBASIC18.47■□□□□ 0.55
HLA-AP01891 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-AP01891 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-AP01891 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-AP01891 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC18.47■□□□□ 0.55
HLA-AP01891 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-AP01891 NTF6A-201ENST00000591175 560 ntBASIC18.47■□□□□ 0.55
HLA-AP01891 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-AP01891 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-AP01891 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.47■□□□□ 0.55
HLA-AP01891 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-AP01891 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-AP01891 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-AP01891 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.47■□□□□ 0.55
HLA-AP01891 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.46■□□□□ 0.55
HLA-AP01891 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HLA-AP01891 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HLA-AP01891 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HLA-AP01891 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HLA-AP01891 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HLA-AP01891 AC131274.2-201ENST00000580697 1507 ntBASIC18.46■□□□□ 0.55
HLA-AP01891 AL592295.1-201ENST00000400984 884 ntBASIC18.46■□□□□ 0.55
HLA-AP01891 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HLA-AP01891 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
HLA-AP01891 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC18.46■□□□□ 0.55
HLA-AP01891 SPCS2P3-201ENST00000500401 656 ntBASIC18.46■□□□□ 0.55
HLA-AP01891 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HLA-AP01891 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HLA-AP01891 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.46■□□□□ 0.55
HLA-AP01891 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HLA-AP01891 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HLA-AP01891 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HLA-AP01891 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HLA-AP01891 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HLA-AP01891 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.46■□□□□ 0.55
HLA-AP01891 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HLA-AP01891 AL121603.2-201ENST00000557373 2117 ntBASIC18.46■□□□□ 0.55
HLA-AP01891 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
HLA-AP01891 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
HLA-AP01891 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-AP01891 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC18.45■□□□□ 0.54
HLA-AP01891 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC18.45■□□□□ 0.54
HLA-AP01891 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-AP01891 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.45■□□□□ 0.54
HLA-AP01891 AC087742.1-201ENST00000575880 1738 ntBASIC18.45■□□□□ 0.54
HLA-AP01891 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.45■□□□□ 0.54
HLA-AP01891 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
HLA-AP01891 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-AP01891 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-AP01891 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-AP01891 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-AP01891 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-AP01891 DUX4L9-201ENST00000449051 1259 ntBASIC18.44■□□□□ 0.54
HLA-AP01891 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
HLA-AP01891 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.44■□□□□ 0.54
HLA-AP01891 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-AP01891 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-AP01891 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-AP01891 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms