Protein–RNA interactions for Protein: P01850

TRBC1, T-cell receptor beta-1 chain C region, humanhuman

Predictions only

Length 177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBC1P01850 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC22.07■■□□□ 1.12
TRBC1P01850 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
TRBC1P01850 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
TRBC1P01850 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TRBC1P01850 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC22.07■■□□□ 1.12
TRBC1P01850 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC22.07■■□□□ 1.12
TRBC1P01850 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC22.07■■□□□ 1.12
TRBC1P01850 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TRBC1P01850 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC22.07■■□□□ 1.12
TRBC1P01850 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
TRBC1P01850 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC22.07■■□□□ 1.12
TRBC1P01850 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC22.06■■□□□ 1.12
TRBC1P01850 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC22.06■■□□□ 1.12
TRBC1P01850 AC099791.1-201ENST00000416440 715 ntBASIC22.06■■□□□ 1.12
TRBC1P01850 AC091305.1-201ENST00000479476 895 ntBASIC22.06■■□□□ 1.12
TRBC1P01850 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC22.06■■□□□ 1.12
TRBC1P01850 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC22.06■■□□□ 1.12
TRBC1P01850 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
TRBC1P01850 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TRBC1P01850 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
TRBC1P01850 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
TRBC1P01850 RASA4CP-201ENST00000424092 1398 ntBASIC22.05■■□□□ 1.12
TRBC1P01850 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TRBC1P01850 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
TRBC1P01850 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TRBC1P01850 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC22.05■■□□□ 1.12
TRBC1P01850 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC22.05■■□□□ 1.12
TRBC1P01850 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC22.05■■□□□ 1.12
TRBC1P01850 AL031602.1-201ENST00000633169 911 ntBASIC22.05■■□□□ 1.12
TRBC1P01850 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
TRBC1P01850 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
TRBC1P01850 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TRBC1P01850 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TRBC1P01850 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
TRBC1P01850 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
TRBC1P01850 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
TRBC1P01850 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TRBC1P01850 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC22.04■■□□□ 1.12
TRBC1P01850 MPST-208ENST00000628507 698 ntTSL 5 BASIC22.04■■□□□ 1.12
TRBC1P01850 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TRBC1P01850 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
TRBC1P01850 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
TRBC1P01850 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TRBC1P01850 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TRBC1P01850 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
TRBC1P01850 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TRBC1P01850 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
TRBC1P01850 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
TRBC1P01850 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC22.03■■□□□ 1.12
TRBC1P01850 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
TRBC1P01850 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
TRBC1P01850 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC22.03■■□□□ 1.12
TRBC1P01850 CA15P2-201ENST00000611168 834 ntBASIC22.03■■□□□ 1.12
TRBC1P01850 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
TRBC1P01850 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
TRBC1P01850 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TRBC1P01850 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
TRBC1P01850 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
TRBC1P01850 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC22.03■■□□□ 1.12
TRBC1P01850 COMT-203ENST00000403184 2217 ntTSL 2 BASIC22.03■■□□□ 1.12
TRBC1P01850 LINC01960-201ENST00000563759 1884 ntBASIC22.03■■□□□ 1.12
TRBC1P01850 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
TRBC1P01850 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC22.03■■□□□ 1.12
TRBC1P01850 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
TRBC1P01850 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
TRBC1P01850 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
TRBC1P01850 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TRBC1P01850 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TRBC1P01850 AP005435.1-201ENST00000529293 1178 ntBASIC22.02■■□□□ 1.12
TRBC1P01850 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC22.02■■□□□ 1.12
TRBC1P01850 AC126544.1-201ENST00000580842 1059 ntBASIC22.02■■□□□ 1.12
TRBC1P01850 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC22.02■■□□□ 1.12
TRBC1P01850 AC068587.7-201ENST00000641602 218 ntBASIC22.02■■□□□ 1.12
TRBC1P01850 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC22.02■■□□□ 1.12
TRBC1P01850 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC22.02■■□□□ 1.12
TRBC1P01850 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TRBC1P01850 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC22.02■■□□□ 1.11
TRBC1P01850 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC22.02■■□□□ 1.11
TRBC1P01850 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC22.02■■□□□ 1.11
TRBC1P01850 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC22.02■■□□□ 1.11
TRBC1P01850 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
TRBC1P01850 EI24-211ENST00000534546 1544 ntTSL 2 BASIC22.01■■□□□ 1.11
TRBC1P01850 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TRBC1P01850 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TRBC1P01850 RBM38-205ENST00000440234 686 ntTSL 2 BASIC22.01■■□□□ 1.11
TRBC1P01850 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC22.01■■□□□ 1.11
TRBC1P01850 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TRBC1P01850 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TRBC1P01850 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
TRBC1P01850 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TRBC1P01850 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TRBC1P01850 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TRBC1P01850 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC22■■□□□ 1.11
TRBC1P01850 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TRBC1P01850 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC22■■□□□ 1.11
TRBC1P01850 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TRBC1P01850 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC22■■□□□ 1.11
TRBC1P01850 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
TRBC1P01850 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC22■■□□□ 1.11
TRBC1P01850 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC22■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms