Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC33.59■■■□□ 2.97
RAPGEF3O95398 AC073210.2-201ENST00000430369 194 ntBASIC33.59■■■□□ 2.97
RAPGEF3O95398 AC133041.1-202ENST00000642053 222 ntBASIC33.59■■■□□ 2.97
RAPGEF3O95398 TMEM202-AS1-202ENST00000565181 2325 ntBASIC33.59■■■□□ 2.97
RAPGEF3O95398 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC33.58■■■□□ 2.97
RAPGEF3O95398 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC33.58■■■□□ 2.97
RAPGEF3O95398 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC33.58■■■□□ 2.97
RAPGEF3O95398 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC33.58■■■□□ 2.97
RAPGEF3O95398 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC33.58■■■□□ 2.97
RAPGEF3O95398 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC33.58■■■□□ 2.97
RAPGEF3O95398 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC33.58■■■□□ 2.97
RAPGEF3O95398 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC33.58■■■□□ 2.97
RAPGEF3O95398 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC33.57■■■□□ 2.96
RAPGEF3O95398 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC33.57■■■□□ 2.96
RAPGEF3O95398 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC33.57■■■□□ 2.96
RAPGEF3O95398 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC33.56■■■□□ 2.96
RAPGEF3O95398 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.96
RAPGEF3O95398 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.96
RAPGEF3O95398 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.96
RAPGEF3O95398 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC33.56■■■□□ 2.96
RAPGEF3O95398 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC33.56■■■□□ 2.96
RAPGEF3O95398 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC33.56■■■□□ 2.96
RAPGEF3O95398 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC33.56■■■□□ 2.96
RAPGEF3O95398 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.96
RAPGEF3O95398 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC33.56■■■□□ 2.96
RAPGEF3O95398 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC33.55■■■□□ 2.96
RAPGEF3O95398 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC33.55■■■□□ 2.96
RAPGEF3O95398 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC33.55■■■□□ 2.96
RAPGEF3O95398 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC33.55■■■□□ 2.96
RAPGEF3O95398 RPS2P52-201ENST00000469610 820 ntBASIC33.55■■■□□ 2.96
RAPGEF3O95398 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC33.55■■■□□ 2.96
RAPGEF3O95398 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC33.54■■■□□ 2.96
RAPGEF3O95398 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC33.54■■■□□ 2.96
RAPGEF3O95398 AC144652.1-201ENST00000609974 1624 ntBASIC33.54■■■□□ 2.96
RAPGEF3O95398 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC33.54■■■□□ 2.96
RAPGEF3O95398 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC33.54■■■□□ 2.96
RAPGEF3O95398 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC33.54■■■□□ 2.96
RAPGEF3O95398 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC33.53■■■□□ 2.96
RAPGEF3O95398 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC33.53■■■□□ 2.96
RAPGEF3O95398 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC33.53■■■□□ 2.96
RAPGEF3O95398 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC33.53■■■□□ 2.96
RAPGEF3O95398 UBE2DNL-204ENST00000602536 740 ntBASIC33.53■■■□□ 2.96
RAPGEF3O95398 AC104187.1-201ENST00000607510 612 ntBASIC33.53■■■□□ 2.96
RAPGEF3O95398 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC33.53■■■□□ 2.96
RAPGEF3O95398 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC33.53■■■□□ 2.96
RAPGEF3O95398 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC33.52■■■□□ 2.96
RAPGEF3O95398 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC33.52■■■□□ 2.96
RAPGEF3O95398 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC33.52■■■□□ 2.96
RAPGEF3O95398 KRT18P29-201ENST00000397031 1267 ntBASIC33.52■■■□□ 2.96
RAPGEF3O95398 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC33.52■■■□□ 2.96
RAPGEF3O95398 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC33.52■■■□□ 2.96
RAPGEF3O95398 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC33.52■■■□□ 2.96
RAPGEF3O95398 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC33.51■■■□□ 2.96
RAPGEF3O95398 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC33.51■■■□□ 2.96
RAPGEF3O95398 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC33.51■■■□□ 2.95
RAPGEF3O95398 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC33.51■■■□□ 2.95
RAPGEF3O95398 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC33.51■■■□□ 2.95
RAPGEF3O95398 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC33.5■■■□□ 2.95
RAPGEF3O95398 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC33.5■■■□□ 2.95
RAPGEF3O95398 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC33.5■■■□□ 2.95
RAPGEF3O95398 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC33.5■■■□□ 2.95
RAPGEF3O95398 PARP1-202ENST00000366792 553 ntTSL 3 BASIC33.5■■■□□ 2.95
RAPGEF3O95398 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC33.5■■■□□ 2.95
RAPGEF3O95398 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC33.5■■■□□ 2.95
RAPGEF3O95398 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC33.5■■■□□ 2.95
RAPGEF3O95398 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC33.5■■■□□ 2.95
RAPGEF3O95398 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC33.5■■■□□ 2.95
RAPGEF3O95398 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC33.5■■■□□ 2.95
RAPGEF3O95398 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC33.5■■■□□ 2.95
RAPGEF3O95398 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC33.5■■■□□ 2.95
RAPGEF3O95398 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC33.5■■■□□ 2.95
RAPGEF3O95398 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC33.49■■■□□ 2.95
RAPGEF3O95398 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC33.49■■■□□ 2.95
RAPGEF3O95398 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC33.49■■■□□ 2.95
RAPGEF3O95398 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC33.48■■■□□ 2.95
RAPGEF3O95398 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC33.48■■■□□ 2.95
RAPGEF3O95398 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC33.48■■■□□ 2.95
RAPGEF3O95398 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC33.48■■■□□ 2.95
RAPGEF3O95398 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC33.48■■■□□ 2.95
RAPGEF3O95398 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC33.48■■■□□ 2.95
RAPGEF3O95398 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC33.47■■■□□ 2.95
RAPGEF3O95398 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC33.47■■■□□ 2.95
RAPGEF3O95398 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC33.47■■■□□ 2.95
RAPGEF3O95398 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC33.47■■■□□ 2.95
RAPGEF3O95398 AF201337.1-201ENST00000520239 748 ntBASIC33.47■■■□□ 2.95
RAPGEF3O95398 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC33.47■■■□□ 2.95
RAPGEF3O95398 EI24-211ENST00000534546 1544 ntTSL 2 BASIC33.47■■■□□ 2.95
RAPGEF3O95398 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC33.47■■■□□ 2.95
RAPGEF3O95398 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC33.46■■■□□ 2.95
RAPGEF3O95398 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC33.46■■■□□ 2.95
RAPGEF3O95398 CNN2P6-201ENST00000439038 900 ntBASIC33.46■■■□□ 2.95
RAPGEF3O95398 AC098590.1-201ENST00000468126 897 ntBASIC33.46■■■□□ 2.95
RAPGEF3O95398 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC33.46■■■□□ 2.95
RAPGEF3O95398 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC33.46■■■□□ 2.95
RAPGEF3O95398 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC33.46■■■□□ 2.95
RAPGEF3O95398 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC33.46■■■□□ 2.95
RAPGEF3O95398 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC33.45■■■□□ 2.95
RAPGEF3O95398 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC33.45■■■□□ 2.95
RAPGEF3O95398 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC33.45■■■□□ 2.95
RAPGEF3O95398 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC33.45■■■□□ 2.95
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms