Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SCN2BO60939 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.85■□□□□ 0.93
SCN2BO60939 KRT125P-201ENST00000546827 989 ntBASIC20.85■□□□□ 0.93
SCN2BO60939 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SCN2BO60939 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SCN2BO60939 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.85■□□□□ 0.93
SCN2BO60939 C11orf96-202ENST00000528572 1834 ntBASIC20.85■□□□□ 0.93
SCN2BO60939 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
SCN2BO60939 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.85■□□□□ 0.93
SCN2BO60939 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SCN2BO60939 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SCN2BO60939 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SCN2BO60939 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SCN2BO60939 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.84■□□□□ 0.93
SCN2BO60939 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.84■□□□□ 0.93
SCN2BO60939 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SCN2BO60939 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SCN2BO60939 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SCN2BO60939 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.84■□□□□ 0.93
SCN2BO60939 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.84■□□□□ 0.93
SCN2BO60939 AC009086.3-201ENST00000623486 1008 ntBASIC20.84■□□□□ 0.93
SCN2BO60939 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.84■□□□□ 0.93
SCN2BO60939 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
SCN2BO60939 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
SCN2BO60939 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.84■□□□□ 0.93
SCN2BO60939 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
SCN2BO60939 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SCN2BO60939 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SCN2BO60939 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SCN2BO60939 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
SCN2BO60939 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
SCN2BO60939 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.83■□□□□ 0.93
SCN2BO60939 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.83■□□□□ 0.93
SCN2BO60939 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
SCN2BO60939 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.83■□□□□ 0.93
SCN2BO60939 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.83■□□□□ 0.93
SCN2BO60939 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SCN2BO60939 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SCN2BO60939 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.83■□□□□ 0.92
SCN2BO60939 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SCN2BO60939 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SCN2BO60939 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
SCN2BO60939 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SCN2BO60939 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SCN2BO60939 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SCN2BO60939 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.82■□□□□ 0.92
SCN2BO60939 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.82■□□□□ 0.92
SCN2BO60939 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
SCN2BO60939 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SCN2BO60939 AC239859.2-201ENST00000444165 318 ntBASIC20.82■□□□□ 0.92
SCN2BO60939 MTDHP2-201ENST00000601468 714 ntBASIC20.82■□□□□ 0.92
SCN2BO60939 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
SCN2BO60939 C17orf82-201ENST00000623772 1530 ntBASIC20.82■□□□□ 0.92
SCN2BO60939 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SCN2BO60939 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SCN2BO60939 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SCN2BO60939 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SCN2BO60939 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
SCN2BO60939 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SCN2BO60939 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SCN2BO60939 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SCN2BO60939 AC009299.2-201ENST00000482477 511 ntBASIC20.81■□□□□ 0.92
SCN2BO60939 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
SCN2BO60939 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.81■□□□□ 0.92
SCN2BO60939 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SCN2BO60939 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SCN2BO60939 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
SCN2BO60939 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
SCN2BO60939 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SCN2BO60939 LINC01960-201ENST00000563759 1884 ntBASIC20.8■□□□□ 0.92
SCN2BO60939 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.8■□□□□ 0.92
SCN2BO60939 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.8■□□□□ 0.92
SCN2BO60939 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SCN2BO60939 AC010997.5-201ENST00000609182 354 ntBASIC20.8■□□□□ 0.92
SCN2BO60939 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SCN2BO60939 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SCN2BO60939 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SCN2BO60939 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
SCN2BO60939 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
SCN2BO60939 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
SCN2BO60939 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SCN2BO60939 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.79■□□□□ 0.92
SCN2BO60939 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SCN2BO60939 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
SCN2BO60939 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SCN2BO60939 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.79■□□□□ 0.92
SCN2BO60939 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.79■□□□□ 0.92
SCN2BO60939 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SCN2BO60939 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.79■□□□□ 0.92
SCN2BO60939 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.79■□□□□ 0.92
SCN2BO60939 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SCN2BO60939 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
SCN2BO60939 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SCN2BO60939 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SCN2BO60939 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SCN2BO60939 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCN2BO60939 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.78■□□□□ 0.92
SCN2BO60939 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCN2BO60939 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCN2BO60939 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms