Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC30.6■■■□□ 2.49
BRD4O60885 MIR6084-201ENST00000622012 110 ntBASIC30.6■■■□□ 2.49
BRD4O60885 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
BRD4O60885 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC30.6■■■□□ 2.49
BRD4O60885 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC30.59■■■□□ 2.49
BRD4O60885 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
BRD4O60885 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
BRD4O60885 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
BRD4O60885 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
BRD4O60885 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC30.59■■■□□ 2.49
BRD4O60885 AC010525.1-201ENST00000585559 441 ntBASIC30.59■■■□□ 2.49
BRD4O60885 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
BRD4O60885 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC30.59■■■□□ 2.49
BRD4O60885 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC30.58■■■□□ 2.49
BRD4O60885 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
BRD4O60885 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC30.58■■■□□ 2.49
BRD4O60885 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
BRD4O60885 LHPP-203ENST00000392757 840 ntTSL 3 BASIC30.58■■■□□ 2.49
BRD4O60885 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC30.58■■■□□ 2.49
BRD4O60885 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC30.58■■■□□ 2.49
BRD4O60885 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
BRD4O60885 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC30.58■■■□□ 2.49
BRD4O60885 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
BRD4O60885 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC30.57■■■□□ 2.49
BRD4O60885 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC30.57■■■□□ 2.48
BRD4O60885 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC30.57■■■□□ 2.48
BRD4O60885 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
BRD4O60885 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
BRD4O60885 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
BRD4O60885 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC30.57■■■□□ 2.48
BRD4O60885 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC30.57■■■□□ 2.48
BRD4O60885 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
BRD4O60885 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
BRD4O60885 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
BRD4O60885 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC30.56■■■□□ 2.48
BRD4O60885 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
BRD4O60885 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC30.56■■■□□ 2.48
BRD4O60885 DUSP8P3-201ENST00000399571 1760 ntBASIC30.56■■■□□ 2.48
BRD4O60885 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC30.56■■■□□ 2.48
BRD4O60885 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
BRD4O60885 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC30.55■■■□□ 2.48
BRD4O60885 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC30.55■■■□□ 2.48
BRD4O60885 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
BRD4O60885 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
BRD4O60885 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC30.55■■■□□ 2.48
BRD4O60885 LINC02228-203ENST00000641970 1355 ntBASIC30.55■■■□□ 2.48
BRD4O60885 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC30.55■■■□□ 2.48
BRD4O60885 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
BRD4O60885 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
BRD4O60885 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC30.55■■■□□ 2.48
BRD4O60885 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
BRD4O60885 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
BRD4O60885 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC30.54■■■□□ 2.48
BRD4O60885 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC30.54■■■□□ 2.48
BRD4O60885 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC30.54■■■□□ 2.48
BRD4O60885 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC30.54■■■□□ 2.48
BRD4O60885 KRT18P14-201ENST00000534205 1250 ntBASIC30.54■■■□□ 2.48
BRD4O60885 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC30.54■■■□□ 2.48
BRD4O60885 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
BRD4O60885 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC30.54■■■□□ 2.48
BRD4O60885 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC30.54■■■□□ 2.48
BRD4O60885 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC30.54■■■□□ 2.48
BRD4O60885 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
BRD4O60885 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC30.54■■■□□ 2.48
BRD4O60885 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC30.54■■■□□ 2.48
BRD4O60885 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC30.54■■■□□ 2.48
BRD4O60885 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC30.54■■■□□ 2.48
BRD4O60885 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
BRD4O60885 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC30.54■■■□□ 2.48
BRD4O60885 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC30.54■■■□□ 2.48
BRD4O60885 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
BRD4O60885 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC30.53■■■□□ 2.48
BRD4O60885 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC30.53■■■□□ 2.48
BRD4O60885 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC30.53■■■□□ 2.48
BRD4O60885 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
BRD4O60885 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC30.53■■■□□ 2.48
BRD4O60885 LTK-203ENST00000453182 2412 ntTSL 2 BASIC30.53■■■□□ 2.48
BRD4O60885 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
BRD4O60885 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
BRD4O60885 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC30.53■■■□□ 2.48
BRD4O60885 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
BRD4O60885 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC30.53■■■□□ 2.48
BRD4O60885 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
BRD4O60885 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
BRD4O60885 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC30.52■■■□□ 2.48
BRD4O60885 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
BRD4O60885 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC30.52■■■□□ 2.48
BRD4O60885 AC144652.1-201ENST00000609974 1624 ntBASIC30.52■■■□□ 2.48
BRD4O60885 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC30.52■■■□□ 2.48
BRD4O60885 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
BRD4O60885 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
BRD4O60885 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
BRD4O60885 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
BRD4O60885 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
BRD4O60885 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
BRD4O60885 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC30.51■■■□□ 2.48
BRD4O60885 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
BRD4O60885 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
BRD4O60885 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
BRD4O60885 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms