Protein–RNA interactions for Protein: O60635

TSPAN1, Tetraspanin-1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1O60635 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
TSPAN1O60635 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
TSPAN1O60635 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC24■■□□□ 1.43
TSPAN1O60635 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
TSPAN1O60635 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
TSPAN1O60635 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC24■■□□□ 1.43
TSPAN1O60635 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
TSPAN1O60635 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC24■■□□□ 1.43
TSPAN1O60635 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC24■■□□□ 1.43
TSPAN1O60635 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC24■■□□□ 1.43
TSPAN1O60635 AL162430.1-201ENST00000480705 870 ntBASIC24■■□□□ 1.43
TSPAN1O60635 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC24■■□□□ 1.43
TSPAN1O60635 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
TSPAN1O60635 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
TSPAN1O60635 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC24■■□□□ 1.43
TSPAN1O60635 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC24■■□□□ 1.43
TSPAN1O60635 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
TSPAN1O60635 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
TSPAN1O60635 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
TSPAN1O60635 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
TSPAN1O60635 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
TSPAN1O60635 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
TSPAN1O60635 RAB43-208ENST00000615093 783 ntTSL 5 BASIC23.99■■□□□ 1.43
TSPAN1O60635 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
TSPAN1O60635 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
TSPAN1O60635 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC23.99■■□□□ 1.43
TSPAN1O60635 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC23.98■■□□□ 1.43
TSPAN1O60635 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
TSPAN1O60635 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TSPAN1O60635 AC123595.1-201ENST00000440769 1046 ntBASIC23.98■■□□□ 1.43
TSPAN1O60635 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC23.98■■□□□ 1.43
TSPAN1O60635 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC23.98■■□□□ 1.43
TSPAN1O60635 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TSPAN1O60635 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
TSPAN1O60635 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TSPAN1O60635 DUSP8P3-201ENST00000399571 1760 ntBASIC23.98■■□□□ 1.43
TSPAN1O60635 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
TSPAN1O60635 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TSPAN1O60635 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
TSPAN1O60635 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TSPAN1O60635 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.97■■□□□ 1.43
TSPAN1O60635 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.97■■□□□ 1.43
TSPAN1O60635 HACD1-201ENST00000326961 773 ntTSL 2 BASIC23.97■■□□□ 1.43
TSPAN1O60635 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC23.97■■□□□ 1.43
TSPAN1O60635 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
TSPAN1O60635 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC23.97■■□□□ 1.43
TSPAN1O60635 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
TSPAN1O60635 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC23.97■■□□□ 1.43
TSPAN1O60635 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC23.97■■□□□ 1.43
TSPAN1O60635 AC010141.3-201ENST00000456659 717 ntBASIC23.97■■□□□ 1.43
TSPAN1O60635 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC23.97■■□□□ 1.43
TSPAN1O60635 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
TSPAN1O60635 MPST-204ENST00000404393 1329 ntTSL 5 BASIC23.96■■□□□ 1.43
TSPAN1O60635 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
TSPAN1O60635 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC23.96■■□□□ 1.43
TSPAN1O60635 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
TSPAN1O60635 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
TSPAN1O60635 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
TSPAN1O60635 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
TSPAN1O60635 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
TSPAN1O60635 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC23.95■■□□□ 1.42
TSPAN1O60635 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.42
TSPAN1O60635 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.42
TSPAN1O60635 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC23.95■■□□□ 1.42
TSPAN1O60635 AC104564.3-201ENST00000582367 638 ntBASIC23.95■■□□□ 1.42
TSPAN1O60635 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC23.95■■□□□ 1.42
TSPAN1O60635 AC092666.2-201ENST00000613287 246 ntBASIC23.95■■□□□ 1.42
TSPAN1O60635 AC087239.1-201ENST00000622671 572 ntBASIC23.95■■□□□ 1.42
TSPAN1O60635 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
TSPAN1O60635 USP45-205ENST00000472914 1617 ntTSL 5 BASIC23.95■■□□□ 1.42
TSPAN1O60635 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC23.95■■□□□ 1.42
TSPAN1O60635 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
TSPAN1O60635 AC034268.1-201ENST00000441047 882 ntBASIC23.94■■□□□ 1.42
TSPAN1O60635 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
TSPAN1O60635 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC23.94■■□□□ 1.42
TSPAN1O60635 DUX4L2-201ENST00000561772 1275 ntBASIC23.94■■□□□ 1.42
TSPAN1O60635 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC23.94■■□□□ 1.42
TSPAN1O60635 DUX4L6-201ENST00000626483 1275 ntBASIC23.94■■□□□ 1.42
TSPAN1O60635 DUX4L1-201ENST00000627662 1275 ntBASIC23.94■■□□□ 1.42
TSPAN1O60635 DUX4L8-201ENST00000629013 1275 ntBASIC23.94■■□□□ 1.42
TSPAN1O60635 DUX4L3-201ENST00000630187 1275 ntBASIC23.94■■□□□ 1.42
TSPAN1O60635 DUX4L7-201ENST00000630678 1275 ntBASIC23.94■■□□□ 1.42
TSPAN1O60635 DUX4L5-201ENST00000630834 1275 ntBASIC23.94■■□□□ 1.42
TSPAN1O60635 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC23.94■■□□□ 1.42
TSPAN1O60635 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
TSPAN1O60635 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
TSPAN1O60635 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC23.94■■□□□ 1.42
TSPAN1O60635 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
TSPAN1O60635 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
TSPAN1O60635 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TSPAN1O60635 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TSPAN1O60635 NT5C3AP1-201ENST00000394500 1012 ntBASIC23.93■■□□□ 1.42
TSPAN1O60635 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC23.93■■□□□ 1.42
TSPAN1O60635 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC23.93■■□□□ 1.42
TSPAN1O60635 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC23.93■■□□□ 1.42
TSPAN1O60635 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
TSPAN1O60635 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
TSPAN1O60635 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC23.93■■□□□ 1.42
TSPAN1O60635 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TSPAN1O60635 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 248.5 ms