Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SSSCA1O60232 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
SSSCA1O60232 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
SSSCA1O60232 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SSSCA1O60232 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SSSCA1O60232 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.9■□□□□ 0.46
SSSCA1O60232 AL592293.1-201ENST00000502889 1188 ntBASIC17.9■□□□□ 0.46
SSSCA1O60232 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC17.9■□□□□ 0.46
SSSCA1O60232 MIR7108-201ENST00000614319 87 ntBASIC17.9■□□□□ 0.46
SSSCA1O60232 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
SSSCA1O60232 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SSSCA1O60232 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SSSCA1O60232 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SSSCA1O60232 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SSSCA1O60232 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SSSCA1O60232 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC17.89■□□□□ 0.46
SSSCA1O60232 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC17.89■□□□□ 0.46
SSSCA1O60232 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC17.89■□□□□ 0.46
SSSCA1O60232 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SSSCA1O60232 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SSSCA1O60232 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SSSCA1O60232 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SSSCA1O60232 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
SSSCA1O60232 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC17.89■□□□□ 0.45
SSSCA1O60232 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SSSCA1O60232 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
SSSCA1O60232 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
SSSCA1O60232 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SSSCA1O60232 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC17.88■□□□□ 0.45
SSSCA1O60232 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SSSCA1O60232 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SSSCA1O60232 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.88■□□□□ 0.45
SSSCA1O60232 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SSSCA1O60232 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SSSCA1O60232 LONRF2P2-201ENST00000439212 571 ntBASIC17.88■□□□□ 0.45
SSSCA1O60232 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SSSCA1O60232 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SSSCA1O60232 AC010542.4-201ENST00000563151 1910 ntBASIC17.88■□□□□ 0.45
SSSCA1O60232 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC17.88■□□□□ 0.45
SSSCA1O60232 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC17.87■□□□□ 0.45
SSSCA1O60232 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC17.87■□□□□ 0.45
SSSCA1O60232 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SSSCA1O60232 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC17.87■□□□□ 0.45
SSSCA1O60232 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
SSSCA1O60232 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SSSCA1O60232 GAK-223ENST00000628912 497 ntTSL 5 BASIC17.87■□□□□ 0.45
SSSCA1O60232 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC17.87■□□□□ 0.45
SSSCA1O60232 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SSSCA1O60232 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SSSCA1O60232 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SSSCA1O60232 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SSSCA1O60232 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC17.87■□□□□ 0.45
SSSCA1O60232 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC17.87■□□□□ 0.45
SSSCA1O60232 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SSSCA1O60232 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SSSCA1O60232 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
SSSCA1O60232 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
SSSCA1O60232 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
SSSCA1O60232 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SSSCA1O60232 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC17.86■□□□□ 0.45
SSSCA1O60232 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SSSCA1O60232 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SSSCA1O60232 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.86■□□□□ 0.45
SSSCA1O60232 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC17.86■□□□□ 0.45
SSSCA1O60232 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SSSCA1O60232 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC17.86■□□□□ 0.45
SSSCA1O60232 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SSSCA1O60232 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SSSCA1O60232 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SSSCA1O60232 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SSSCA1O60232 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
SSSCA1O60232 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC17.85■□□□□ 0.45
SSSCA1O60232 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SSSCA1O60232 LBH-205ENST00000407930 756 ntTSL 2 BASIC17.85■□□□□ 0.45
SSSCA1O60232 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
SSSCA1O60232 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC17.85■□□□□ 0.45
SSSCA1O60232 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SSSCA1O60232 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC17.85■□□□□ 0.45
SSSCA1O60232 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
SSSCA1O60232 PVT1-219ENST00000523427 938 ntTSL 3 BASIC17.85■□□□□ 0.45
SSSCA1O60232 USF2-207ENST00000595068 1612 ntTSL 5 BASIC17.85■□□□□ 0.45
SSSCA1O60232 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SSSCA1O60232 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SSSCA1O60232 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SSSCA1O60232 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SSSCA1O60232 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SSSCA1O60232 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
SSSCA1O60232 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SSSCA1O60232 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC17.84■□□□□ 0.45
SSSCA1O60232 DUX4L9-201ENST00000449051 1259 ntBASIC17.84■□□□□ 0.45
SSSCA1O60232 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
SSSCA1O60232 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SSSCA1O60232 AC005229.4-201ENST00000610085 2198 ntBASIC17.84■□□□□ 0.45
SSSCA1O60232 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC17.84■□□□□ 0.45
SSSCA1O60232 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC17.84■□□□□ 0.45
SSSCA1O60232 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SSSCA1O60232 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SSSCA1O60232 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.84■□□□□ 0.45
SSSCA1O60232 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC17.83■□□□□ 0.45
SSSCA1O60232 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms