Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
IDH3BO43837 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
IDH3BO43837 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
IDH3BO43837 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
IDH3BO43837 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
IDH3BO43837 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
IDH3BO43837 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
IDH3BO43837 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.04■□□□□ 0.8
IDH3BO43837 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
IDH3BO43837 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.04■□□□□ 0.8
IDH3BO43837 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.04■□□□□ 0.8
IDH3BO43837 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
IDH3BO43837 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
IDH3BO43837 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
IDH3BO43837 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
IDH3BO43837 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
IDH3BO43837 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.04■□□□□ 0.8
IDH3BO43837 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.04■□□□□ 0.8
IDH3BO43837 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
IDH3BO43837 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
IDH3BO43837 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
IDH3BO43837 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
IDH3BO43837 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
IDH3BO43837 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.03■□□□□ 0.8
IDH3BO43837 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.03■□□□□ 0.8
IDH3BO43837 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
IDH3BO43837 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
IDH3BO43837 AC144652.1-201ENST00000609974 1624 ntBASIC20.03■□□□□ 0.8
IDH3BO43837 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.03■□□□□ 0.8
IDH3BO43837 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
IDH3BO43837 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.03■□□□□ 0.8
IDH3BO43837 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
IDH3BO43837 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.03■□□□□ 0.8
IDH3BO43837 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
IDH3BO43837 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.03■□□□□ 0.8
IDH3BO43837 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
IDH3BO43837 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
IDH3BO43837 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
IDH3BO43837 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
IDH3BO43837 AC092667.1-201ENST00000434301 2586 ntBASIC20.02■□□□□ 0.8
IDH3BO43837 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
IDH3BO43837 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
IDH3BO43837 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
IDH3BO43837 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
IDH3BO43837 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.02■□□□□ 0.8
IDH3BO43837 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
IDH3BO43837 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.02■□□□□ 0.8
IDH3BO43837 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.02■□□□□ 0.8
IDH3BO43837 MIR6722-201ENST00000617286 78 ntBASIC20.02■□□□□ 0.8
IDH3BO43837 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.02■□□□□ 0.8
IDH3BO43837 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
IDH3BO43837 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
IDH3BO43837 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
IDH3BO43837 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.02■□□□□ 0.8
IDH3BO43837 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
IDH3BO43837 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.02■□□□□ 0.79
IDH3BO43837 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.02■□□□□ 0.79
IDH3BO43837 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
IDH3BO43837 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
IDH3BO43837 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.02■□□□□ 0.79
IDH3BO43837 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
IDH3BO43837 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.01■□□□□ 0.79
IDH3BO43837 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
IDH3BO43837 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
IDH3BO43837 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
IDH3BO43837 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
IDH3BO43837 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
IDH3BO43837 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.01■□□□□ 0.79
IDH3BO43837 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
IDH3BO43837 AC242852.2-201ENST00000615738 1807 ntBASIC20.01■□□□□ 0.79
IDH3BO43837 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
IDH3BO43837 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
IDH3BO43837 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
IDH3BO43837 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
IDH3BO43837 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
IDH3BO43837 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
IDH3BO43837 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
IDH3BO43837 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
IDH3BO43837 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20■□□□□ 0.79
IDH3BO43837 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20■□□□□ 0.79
IDH3BO43837 AL031848.2-201ENST00000607670 837 ntBASIC20■□□□□ 0.79
IDH3BO43837 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20■□□□□ 0.79
IDH3BO43837 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20■□□□□ 0.79
IDH3BO43837 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20■□□□□ 0.79
IDH3BO43837 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
IDH3BO43837 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
IDH3BO43837 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
IDH3BO43837 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20■□□□□ 0.79
IDH3BO43837 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20■□□□□ 0.79
IDH3BO43837 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
IDH3BO43837 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20■□□□□ 0.79
IDH3BO43837 AC005703.6-201ENST00000623265 1329 ntBASIC20■□□□□ 0.79
IDH3BO43837 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
IDH3BO43837 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
IDH3BO43837 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.99■□□□□ 0.79
IDH3BO43837 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.99■□□□□ 0.79
IDH3BO43837 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
IDH3BO43837 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
IDH3BO43837 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.99■□□□□ 0.79
IDH3BO43837 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms