Protein–RNA interactions for Protein: O00743

PPP6C, Serine/threonine-protein phosphatase 6 catalytic subunit, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP6CO00743 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PPP6CO00743 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.4■■□□□ 1.02
PPP6CO00743 C17orf82-201ENST00000623772 1530 ntBASIC21.4■■□□□ 1.02
PPP6CO00743 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PPP6CO00743 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PPP6CO00743 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PPP6CO00743 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PPP6CO00743 UNC93B8-201ENST00000511903 705 ntBASIC21.4■■□□□ 1.02
PPP6CO00743 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PPP6CO00743 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
PPP6CO00743 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PPP6CO00743 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PPP6CO00743 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.4■■□□□ 1.02
PPP6CO00743 LINC01960-201ENST00000563759 1884 ntBASIC21.39■■□□□ 1.02
PPP6CO00743 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.39■■□□□ 1.02
PPP6CO00743 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
PPP6CO00743 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.39■■□□□ 1.01
PPP6CO00743 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
PPP6CO00743 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
PPP6CO00743 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PPP6CO00743 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PPP6CO00743 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.39■■□□□ 1.01
PPP6CO00743 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
PPP6CO00743 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
PPP6CO00743 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
PPP6CO00743 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
PPP6CO00743 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PPP6CO00743 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PPP6CO00743 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.38■■□□□ 1.01
PPP6CO00743 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PPP6CO00743 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.37■■□□□ 1.01
PPP6CO00743 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
PPP6CO00743 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
PPP6CO00743 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.37■■□□□ 1.01
PPP6CO00743 AC009086.3-201ENST00000623486 1008 ntBASIC21.37■■□□□ 1.01
PPP6CO00743 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.37■■□□□ 1.01
PPP6CO00743 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.37■■□□□ 1.01
PPP6CO00743 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
PPP6CO00743 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PPP6CO00743 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.37■■□□□ 1.01
PPP6CO00743 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PPP6CO00743 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PPP6CO00743 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PPP6CO00743 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.36■■□□□ 1.01
PPP6CO00743 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.36■■□□□ 1.01
PPP6CO00743 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PPP6CO00743 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PPP6CO00743 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
PPP6CO00743 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.35■■□□□ 1.01
PPP6CO00743 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
PPP6CO00743 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.35■■□□□ 1.01
PPP6CO00743 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
PPP6CO00743 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PPP6CO00743 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PPP6CO00743 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
PPP6CO00743 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
PPP6CO00743 FBXW4P1-201ENST00000426721 2239 ntBASIC21.35■■□□□ 1.01
PPP6CO00743 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
PPP6CO00743 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.34■■□□□ 1.01
PPP6CO00743 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.34■■□□□ 1.01
PPP6CO00743 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.34■■□□□ 1.01
PPP6CO00743 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PPP6CO00743 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PPP6CO00743 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PPP6CO00743 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.34■■□□□ 1.01
PPP6CO00743 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PPP6CO00743 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PPP6CO00743 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PPP6CO00743 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.33■■□□□ 1.01
PPP6CO00743 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.33■■□□□ 1.01
PPP6CO00743 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.33■■□□□ 1.01
PPP6CO00743 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
PPP6CO00743 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
PPP6CO00743 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PPP6CO00743 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PPP6CO00743 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.33■■□□□ 1.01
PPP6CO00743 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.33■■□□□ 1.01
PPP6CO00743 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PPP6CO00743 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PPP6CO00743 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.33■■□□□ 1
PPP6CO00743 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PPP6CO00743 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.32■■□□□ 1
PPP6CO00743 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PPP6CO00743 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.32■■□□□ 1
PPP6CO00743 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.32■■□□□ 1
PPP6CO00743 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.32■■□□□ 1
PPP6CO00743 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PPP6CO00743 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
PPP6CO00743 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PPP6CO00743 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
PPP6CO00743 AL137060.1-201ENST00000618151 2648 ntBASIC21.32■■□□□ 1
PPP6CO00743 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
PPP6CO00743 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
PPP6CO00743 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PPP6CO00743 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PPP6CO00743 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.32■■□□□ 1
PPP6CO00743 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.31■■□□□ 1
PPP6CO00743 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.31■■□□□ 1
PPP6CO00743 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
PPP6CO00743 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms