Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC28.48■■■□□ 2.15
CHL1O00533 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
CHL1O00533 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC28.48■■■□□ 2.15
CHL1O00533 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC28.48■■■□□ 2.15
CHL1O00533 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
CHL1O00533 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC28.48■■■□□ 2.15
CHL1O00533 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC28.47■■■□□ 2.15
CHL1O00533 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
CHL1O00533 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC28.47■■■□□ 2.15
CHL1O00533 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC28.47■■■□□ 2.15
CHL1O00533 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC28.47■■■□□ 2.15
CHL1O00533 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
CHL1O00533 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
CHL1O00533 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
CHL1O00533 GCA-201ENST00000233612 1694 ntTSL 2 BASIC28.47■■■□□ 2.15
CHL1O00533 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC28.47■■■□□ 2.15
CHL1O00533 USP45-205ENST00000472914 1617 ntTSL 5 BASIC28.47■■■□□ 2.15
CHL1O00533 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
CHL1O00533 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC28.47■■■□□ 2.15
CHL1O00533 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC28.46■■■□□ 2.15
CHL1O00533 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
CHL1O00533 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
CHL1O00533 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC28.46■■■□□ 2.15
CHL1O00533 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
CHL1O00533 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC28.46■■■□□ 2.15
CHL1O00533 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
CHL1O00533 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC28.46■■■□□ 2.15
CHL1O00533 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC28.46■■■□□ 2.15
CHL1O00533 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC28.46■■■□□ 2.15
CHL1O00533 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
CHL1O00533 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC28.45■■■□□ 2.15
CHL1O00533 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
CHL1O00533 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC28.45■■■□□ 2.14
CHL1O00533 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC28.45■■■□□ 2.14
CHL1O00533 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC28.45■■■□□ 2.14
CHL1O00533 RARA-203ENST00000394086 2008 ntTSL 2 BASIC28.45■■■□□ 2.14
CHL1O00533 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC28.44■■■□□ 2.14
CHL1O00533 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
CHL1O00533 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC28.44■■■□□ 2.14
CHL1O00533 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC28.44■■■□□ 2.14
CHL1O00533 DUSP8P5-201ENST00000422884 1815 ntBASIC28.44■■■□□ 2.14
CHL1O00533 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC28.44■■■□□ 2.14
CHL1O00533 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC28.44■■■□□ 2.14
CHL1O00533 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC28.44■■■□□ 2.14
CHL1O00533 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC28.44■■■□□ 2.14
CHL1O00533 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC28.44■■■□□ 2.14
CHL1O00533 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC28.44■■■□□ 2.14
CHL1O00533 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
CHL1O00533 MIR6821-201ENST00000617625 74 ntBASIC28.44■■■□□ 2.14
CHL1O00533 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC28.44■■■□□ 2.14
CHL1O00533 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC28.44■■■□□ 2.14
CHL1O00533 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC28.43■■■□□ 2.14
CHL1O00533 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
CHL1O00533 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
CHL1O00533 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC28.43■■■□□ 2.14
CHL1O00533 LHPP-203ENST00000392757 840 ntTSL 3 BASIC28.43■■■□□ 2.14
CHL1O00533 AC097381.1-201ENST00000429019 1296 ntBASIC28.43■■■□□ 2.14
CHL1O00533 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC28.43■■■□□ 2.14
CHL1O00533 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC28.43■■■□□ 2.14
CHL1O00533 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
CHL1O00533 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
CHL1O00533 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
CHL1O00533 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
CHL1O00533 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC28.42■■■□□ 2.14
CHL1O00533 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC28.42■■■□□ 2.14
CHL1O00533 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
CHL1O00533 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
CHL1O00533 AC010141.3-201ENST00000456659 717 ntBASIC28.42■■■□□ 2.14
CHL1O00533 AL358852.1-201ENST00000623174 1268 ntBASIC28.42■■■□□ 2.14
CHL1O00533 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC28.42■■■□□ 2.14
CHL1O00533 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC28.42■■■□□ 2.14
CHL1O00533 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC28.42■■■□□ 2.14
CHL1O00533 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
CHL1O00533 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
CHL1O00533 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC28.41■■■□□ 2.14
CHL1O00533 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC28.41■■■□□ 2.14
CHL1O00533 AK1-201ENST00000223836 736 ntTSL 3 BASIC28.41■■■□□ 2.14
CHL1O00533 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
CHL1O00533 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC28.41■■■□□ 2.14
CHL1O00533 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC28.41■■■□□ 2.14
CHL1O00533 AC012414.1-201ENST00000556676 535 ntBASIC28.41■■■□□ 2.14
CHL1O00533 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC28.41■■■□□ 2.14
CHL1O00533 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC28.41■■■□□ 2.14
CHL1O00533 CASK-201ENST00000378154 2494 ntTSL 5 BASIC28.41■■■□□ 2.14
CHL1O00533 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
CHL1O00533 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC28.4■■■□□ 2.14
CHL1O00533 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC28.4■■■□□ 2.14
CHL1O00533 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC28.4■■■□□ 2.14
CHL1O00533 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC28.4■■■□□ 2.14
CHL1O00533 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC28.4■■■□□ 2.14
CHL1O00533 SP2-202ENST00000613139 908 ntTSL 5 BASIC28.4■■■□□ 2.14
CHL1O00533 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
CHL1O00533 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC28.39■■■□□ 2.14
CHL1O00533 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC28.39■■■□□ 2.14
CHL1O00533 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC28.39■■■□□ 2.13
CHL1O00533 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
CHL1O00533 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC28.39■■■□□ 2.13
CHL1O00533 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
CHL1O00533 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC28.38■■■□□ 2.13
CHL1O00533 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms