Protein–RNA interactions for Protein: J3QRE1

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
J3QRE1 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
J3QRE1 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
J3QRE1 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
J3QRE1 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
J3QRE1 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
J3QRE1 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
J3QRE1 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.49■□□□□ 0.71
J3QRE1 CA15P2-201ENST00000611168 834 ntBASIC19.49■□□□□ 0.71
J3QRE1 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
J3QRE1 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.49■□□□□ 0.71
J3QRE1 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
J3QRE1 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
J3QRE1 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
J3QRE1 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
J3QRE1 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.48■□□□□ 0.71
J3QRE1 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
J3QRE1 AC009086.3-201ENST00000623486 1008 ntBASIC19.48■□□□□ 0.71
J3QRE1 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
J3QRE1 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
J3QRE1 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
J3QRE1 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
J3QRE1 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
J3QRE1 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
J3QRE1 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
J3QRE1 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.47■□□□□ 0.71
J3QRE1 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.47■□□□□ 0.71
J3QRE1 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.47■□□□□ 0.71
J3QRE1 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
J3QRE1 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
J3QRE1 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
J3QRE1 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
J3QRE1 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
J3QRE1 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
J3QRE1 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
J3QRE1 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
J3QRE1 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.47■□□□□ 0.71
J3QRE1 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
J3QRE1 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.47■□□□□ 0.71
J3QRE1 AC244015.2-201ENST00000616358 1861 ntBASIC19.47■□□□□ 0.71
J3QRE1 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
J3QRE1 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
J3QRE1 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
J3QRE1 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
J3QRE1 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
J3QRE1 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
J3QRE1 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
J3QRE1 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.46■□□□□ 0.71
J3QRE1 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.46■□□□□ 0.71
J3QRE1 AC137630.3-201ENST00000607245 391 ntBASIC19.46■□□□□ 0.71
J3QRE1 MIR6722-201ENST00000617286 78 ntBASIC19.46■□□□□ 0.71
J3QRE1 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.46■□□□□ 0.71
J3QRE1 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.46■□□□□ 0.71
J3QRE1 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
J3QRE1 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
J3QRE1 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
J3QRE1 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
J3QRE1 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.46■□□□□ 0.71
J3QRE1 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
J3QRE1 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
J3QRE1 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
J3QRE1 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
J3QRE1 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
J3QRE1 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
J3QRE1 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
J3QRE1 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
J3QRE1 AC005229.4-201ENST00000610085 2198 ntBASIC19.45■□□□□ 0.7
J3QRE1 AC103834.1-201ENST00000520383 144 ntBASIC19.45■□□□□ 0.7
J3QRE1 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
J3QRE1 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
J3QRE1 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
J3QRE1 AC005703.6-201ENST00000623265 1329 ntBASIC19.45■□□□□ 0.7
J3QRE1 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
J3QRE1 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
J3QRE1 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
J3QRE1 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
J3QRE1 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
J3QRE1 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
J3QRE1 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
J3QRE1 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
J3QRE1 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
J3QRE1 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
J3QRE1 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.44■□□□□ 0.7
J3QRE1 TSPY13P-201ENST00000338964 914 ntBASIC19.44■□□□□ 0.7
J3QRE1 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.44■□□□□ 0.7
J3QRE1 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
J3QRE1 BRD4-212ENST00000630599 726 ntTSL 2 BASIC19.44■□□□□ 0.7
J3QRE1 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
J3QRE1 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
J3QRE1 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.43■□□□□ 0.7
J3QRE1 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
J3QRE1 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.43■□□□□ 0.7
J3QRE1 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
J3QRE1 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
J3QRE1 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
J3QRE1 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.43■□□□□ 0.7
J3QRE1 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
J3QRE1 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
J3QRE1 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
J3QRE1 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
J3QRE1 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms