Protein–RNA interactions for Protein: A8MXY4

ZNF99, Zinc finger protein 99, humanhuman

Predicted RBP Predictions only

Length 864 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF99A8MXY4 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.3■□□□□ 0.84
ZNF99A8MXY4 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZNF99A8MXY4 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
ZNF99A8MXY4 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.3■□□□□ 0.84
ZNF99A8MXY4 AC021242.3-201ENST00000607598 1377 ntBASIC20.3■□□□□ 0.84
ZNF99A8MXY4 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ZNF99A8MXY4 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ZNF99A8MXY4 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.29■□□□□ 0.84
ZNF99A8MXY4 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF99A8MXY4 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.29■□□□□ 0.84
ZNF99A8MXY4 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.29■□□□□ 0.84
ZNF99A8MXY4 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF99A8MXY4 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF99A8MXY4 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF99A8MXY4 AL022069.1-201ENST00000568025 1636 ntBASIC20.29■□□□□ 0.84
ZNF99A8MXY4 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
ZNF99A8MXY4 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.29■□□□□ 0.84
ZNF99A8MXY4 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.29■□□□□ 0.84
ZNF99A8MXY4 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF99A8MXY4 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF99A8MXY4 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF99A8MXY4 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF99A8MXY4 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF99A8MXY4 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.28■□□□□ 0.84
ZNF99A8MXY4 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF99A8MXY4 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF99A8MXY4 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF99A8MXY4 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.28■□□□□ 0.84
ZNF99A8MXY4 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.28■□□□□ 0.84
ZNF99A8MXY4 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.28■□□□□ 0.84
ZNF99A8MXY4 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.28■□□□□ 0.84
ZNF99A8MXY4 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.28■□□□□ 0.84
ZNF99A8MXY4 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.28■□□□□ 0.84
ZNF99A8MXY4 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.28■□□□□ 0.84
ZNF99A8MXY4 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF99A8MXY4 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF99A8MXY4 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
ZNF99A8MXY4 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
ZNF99A8MXY4 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
ZNF99A8MXY4 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
ZNF99A8MXY4 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ZNF99A8MXY4 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZNF99A8MXY4 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.27■□□□□ 0.84
ZNF99A8MXY4 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZNF99A8MXY4 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZNF99A8MXY4 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.27■□□□□ 0.84
ZNF99A8MXY4 AC239859.2-201ENST00000444165 318 ntBASIC20.27■□□□□ 0.84
ZNF99A8MXY4 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZNF99A8MXY4 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
ZNF99A8MXY4 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
ZNF99A8MXY4 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.83
ZNF99A8MXY4 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
ZNF99A8MXY4 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF99A8MXY4 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF99A8MXY4 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF99A8MXY4 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF99A8MXY4 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
ZNF99A8MXY4 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF99A8MXY4 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF99A8MXY4 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF99A8MXY4 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
ZNF99A8MXY4 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
ZNF99A8MXY4 AC131274.2-201ENST00000580697 1507 ntBASIC20.26■□□□□ 0.83
ZNF99A8MXY4 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
ZNF99A8MXY4 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
ZNF99A8MXY4 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF99A8MXY4 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF99A8MXY4 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
ZNF99A8MXY4 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF99A8MXY4 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF99A8MXY4 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF99A8MXY4 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.25■□□□□ 0.83
ZNF99A8MXY4 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF99A8MXY4 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
ZNF99A8MXY4 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF99A8MXY4 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
ZNF99A8MXY4 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
ZNF99A8MXY4 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF99A8MXY4 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.24■□□□□ 0.83
ZNF99A8MXY4 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
ZNF99A8MXY4 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
ZNF99A8MXY4 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF99A8MXY4 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF99A8MXY4 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF99A8MXY4 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.24■□□□□ 0.83
ZNF99A8MXY4 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.24■□□□□ 0.83
ZNF99A8MXY4 MIR4787-201ENST00000607364 84 ntBASIC20.24■□□□□ 0.83
ZNF99A8MXY4 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF99A8MXY4 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF99A8MXY4 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF99A8MXY4 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF99A8MXY4 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF99A8MXY4 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
ZNF99A8MXY4 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
ZNF99A8MXY4 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF99A8MXY4 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.24■□□□□ 0.83
ZNF99A8MXY4 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.24■□□□□ 0.83
ZNF99A8MXY4 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.23■□□□□ 0.83
ZNF99A8MXY4 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
ZNF99A8MXY4 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms