Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC189A1A4V9 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.9■■□□□ 1.1
CCDC189A1A4V9 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC189A1A4V9 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.9■■□□□ 1.1
CCDC189A1A4V9 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.9■■□□□ 1.1
CCDC189A1A4V9 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.89■■□□□ 1.09
CCDC189A1A4V9 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC189A1A4V9 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.89■■□□□ 1.09
CCDC189A1A4V9 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC189A1A4V9 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC189A1A4V9 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
CCDC189A1A4V9 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CCDC189A1A4V9 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.88■■□□□ 1.09
CCDC189A1A4V9 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC21.88■■□□□ 1.09
CCDC189A1A4V9 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCDC189A1A4V9 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
CCDC189A1A4V9 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
CCDC189A1A4V9 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
CCDC189A1A4V9 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CCDC189A1A4V9 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCDC189A1A4V9 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
CCDC189A1A4V9 EML3-217ENST00000531557 2509 ntTSL 5 BASIC21.88■■□□□ 1.09
CCDC189A1A4V9 GUSBP5-202ENST00000510805 1989 ntBASIC21.88■■□□□ 1.09
CCDC189A1A4V9 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CCDC189A1A4V9 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.88■■□□□ 1.09
CCDC189A1A4V9 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.87■■□□□ 1.09
CCDC189A1A4V9 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.87■■□□□ 1.09
CCDC189A1A4V9 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCDC189A1A4V9 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCDC189A1A4V9 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
CCDC189A1A4V9 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCDC189A1A4V9 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCDC189A1A4V9 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.87■■□□□ 1.09
CCDC189A1A4V9 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
CCDC189A1A4V9 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCDC189A1A4V9 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCDC189A1A4V9 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.87■■□□□ 1.09
CCDC189A1A4V9 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
CCDC189A1A4V9 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCDC189A1A4V9 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
CCDC189A1A4V9 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.87■■□□□ 1.09
CCDC189A1A4V9 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCDC189A1A4V9 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.87■■□□□ 1.09
CCDC189A1A4V9 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.87■■□□□ 1.09
CCDC189A1A4V9 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCDC189A1A4V9 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.87■■□□□ 1.09
CCDC189A1A4V9 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.87■■□□□ 1.09
CCDC189A1A4V9 AC127496.7-201ENST00000625110 1798 ntBASIC21.87■■□□□ 1.09
CCDC189A1A4V9 LINC01529-204ENST00000636474 1715 ntBASIC21.86■■□□□ 1.09
CCDC189A1A4V9 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC189A1A4V9 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC189A1A4V9 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC189A1A4V9 AC092028.1-203ENST00000608262 953 ntBASIC21.86■■□□□ 1.09
CCDC189A1A4V9 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
CCDC189A1A4V9 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC189A1A4V9 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.86■■□□□ 1.09
CCDC189A1A4V9 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC189A1A4V9 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC189A1A4V9 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
CCDC189A1A4V9 ECEL1P1-201ENST00000373592 1742 ntBASIC21.86■■□□□ 1.09
CCDC189A1A4V9 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC189A1A4V9 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
CCDC189A1A4V9 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC189A1A4V9 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC189A1A4V9 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.85■■□□□ 1.09
CCDC189A1A4V9 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC189A1A4V9 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC189A1A4V9 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC189A1A4V9 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.85■■□□□ 1.09
CCDC189A1A4V9 KRT125P-201ENST00000546827 989 ntBASIC21.85■■□□□ 1.09
CCDC189A1A4V9 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.85■■□□□ 1.09
CCDC189A1A4V9 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC189A1A4V9 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC189A1A4V9 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.85■■□□□ 1.09
CCDC189A1A4V9 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.84■■□□□ 1.09
CCDC189A1A4V9 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
CCDC189A1A4V9 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.84■■□□□ 1.09
CCDC189A1A4V9 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC189A1A4V9 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
CCDC189A1A4V9 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.84■■□□□ 1.09
CCDC189A1A4V9 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.84■■□□□ 1.09
CCDC189A1A4V9 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC21.84■■□□□ 1.09
CCDC189A1A4V9 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC189A1A4V9 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC189A1A4V9 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC189A1A4V9 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
CCDC189A1A4V9 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.83■■□□□ 1.09
CCDC189A1A4V9 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC189A1A4V9 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.83■■□□□ 1.09
CCDC189A1A4V9 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC189A1A4V9 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.83■■□□□ 1.09
CCDC189A1A4V9 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.83■■□□□ 1.09
CCDC189A1A4V9 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC189A1A4V9 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC189A1A4V9 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CCDC189A1A4V9 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CCDC189A1A4V9 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.82■■□□□ 1.08
CCDC189A1A4V9 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC21.82■■□□□ 1.08
CCDC189A1A4V9 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC189A1A4V9 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms