Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
TCRBV9S1A1TA0A576 BX664725.1-201ENST00000438252 379 ntBASIC22.16■■□□□ 1.14
TCRBV9S1A1TA0A576 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC22.16■■□□□ 1.14
TCRBV9S1A1TA0A576 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TCRBV9S1A1TA0A576 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
TCRBV9S1A1TA0A576 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TCRBV9S1A1TA0A576 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
TCRBV9S1A1TA0A576 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
TCRBV9S1A1TA0A576 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TCRBV9S1A1TA0A576 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
TCRBV9S1A1TA0A576 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TCRBV9S1A1TA0A576 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
TCRBV9S1A1TA0A576 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
TCRBV9S1A1TA0A576 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TCRBV9S1A1TA0A576 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TCRBV9S1A1TA0A576 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
TCRBV9S1A1TA0A576 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC22.15■■□□□ 1.14
TCRBV9S1A1TA0A576 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC22.15■■□□□ 1.14
TCRBV9S1A1TA0A576 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TCRBV9S1A1TA0A576 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC22.15■■□□□ 1.14
TCRBV9S1A1TA0A576 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC22.15■■□□□ 1.14
TCRBV9S1A1TA0A576 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TCRBV9S1A1TA0A576 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC22.15■■□□□ 1.14
TCRBV9S1A1TA0A576 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC22.15■■□□□ 1.14
TCRBV9S1A1TA0A576 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
TCRBV9S1A1TA0A576 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC22.14■■□□□ 1.14
TCRBV9S1A1TA0A576 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
TCRBV9S1A1TA0A576 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
TCRBV9S1A1TA0A576 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC22.14■■□□□ 1.13
TCRBV9S1A1TA0A576 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC22.14■■□□□ 1.13
TCRBV9S1A1TA0A576 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC22.14■■□□□ 1.13
TCRBV9S1A1TA0A576 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC22.14■■□□□ 1.13
TCRBV9S1A1TA0A576 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
TCRBV9S1A1TA0A576 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
TCRBV9S1A1TA0A576 PRTG-204ENST00000561292 833 ntTSL 3 BASIC22.13■■□□□ 1.13
TCRBV9S1A1TA0A576 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC22.13■■□□□ 1.13
TCRBV9S1A1TA0A576 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC22.13■■□□□ 1.13
TCRBV9S1A1TA0A576 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
TCRBV9S1A1TA0A576 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
TCRBV9S1A1TA0A576 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TCRBV9S1A1TA0A576 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TCRBV9S1A1TA0A576 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TCRBV9S1A1TA0A576 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC22.12■■□□□ 1.13
TCRBV9S1A1TA0A576 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TCRBV9S1A1TA0A576 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
TCRBV9S1A1TA0A576 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC22.12■■□□□ 1.13
TCRBV9S1A1TA0A576 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
TCRBV9S1A1TA0A576 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
TCRBV9S1A1TA0A576 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC22.12■■□□□ 1.13
TCRBV9S1A1TA0A576 AC009102.2-201ENST00000606772 1639 ntBASIC22.12■■□□□ 1.13
TCRBV9S1A1TA0A576 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
TCRBV9S1A1TA0A576 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
TCRBV9S1A1TA0A576 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC22.11■■□□□ 1.13
TCRBV9S1A1TA0A576 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC22.11■■□□□ 1.13
TCRBV9S1A1TA0A576 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC22.11■■□□□ 1.13
TCRBV9S1A1TA0A576 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC22.11■■□□□ 1.13
TCRBV9S1A1TA0A576 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
TCRBV9S1A1TA0A576 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TCRBV9S1A1TA0A576 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC22.11■■□□□ 1.13
TCRBV9S1A1TA0A576 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC22.11■■□□□ 1.13
TCRBV9S1A1TA0A576 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
TCRBV9S1A1TA0A576 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TCRBV9S1A1TA0A576 NKILA-201ENST00000613231 537 ntTSL 4 BASIC22.11■■□□□ 1.13
TCRBV9S1A1TA0A576 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TCRBV9S1A1TA0A576 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TCRBV9S1A1TA0A576 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
TCRBV9S1A1TA0A576 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
TCRBV9S1A1TA0A576 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TCRBV9S1A1TA0A576 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
TCRBV9S1A1TA0A576 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TCRBV9S1A1TA0A576 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
TCRBV9S1A1TA0A576 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC22.1■■□□□ 1.13
TCRBV9S1A1TA0A576 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TCRBV9S1A1TA0A576 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
TCRBV9S1A1TA0A576 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TCRBV9S1A1TA0A576 AC092028.1-203ENST00000608262 953 ntBASIC22.1■■□□□ 1.13
TCRBV9S1A1TA0A576 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC22.1■■□□□ 1.13
TCRBV9S1A1TA0A576 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TCRBV9S1A1TA0A576 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC22.1■■□□□ 1.13
TCRBV9S1A1TA0A576 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TCRBV9S1A1TA0A576 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TCRBV9S1A1TA0A576 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
TCRBV9S1A1TA0A576 AC010542.4-201ENST00000563151 1910 ntBASIC22.1■■□□□ 1.13
TCRBV9S1A1TA0A576 AC004687.1-201ENST00000579003 1625 ntBASIC22.09■■□□□ 1.13
TCRBV9S1A1TA0A576 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
TCRBV9S1A1TA0A576 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
TCRBV9S1A1TA0A576 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TCRBV9S1A1TA0A576 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC22.09■■□□□ 1.13
TCRBV9S1A1TA0A576 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC22.09■■□□□ 1.13
TCRBV9S1A1TA0A576 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TCRBV9S1A1TA0A576 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC22.09■■□□□ 1.13
TCRBV9S1A1TA0A576 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC22.09■■□□□ 1.13
TCRBV9S1A1TA0A576 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
TCRBV9S1A1TA0A576 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TCRBV9S1A1TA0A576 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TCRBV9S1A1TA0A576 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
TCRBV9S1A1TA0A576 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
TCRBV9S1A1TA0A576 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
TCRBV9S1A1TA0A576 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC22.09■■□□□ 1.13
TCRBV9S1A1TA0A576 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms