Protein–RNA interactions for Protein: A0A0B4J237

TRAV8-2, T-cell receptor alpha variable 8-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-2A0A0B4J237 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV8-2A0A0B4J237 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC16.67■□□□□ 0.26
TRAV8-2A0A0B4J237 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV8-2A0A0B4J237 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV8-2A0A0B4J237 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC16.67■□□□□ 0.26
TRAV8-2A0A0B4J237 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
TRAV8-2A0A0B4J237 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV8-2A0A0B4J237 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV8-2A0A0B4J237 AC009299.2-201ENST00000482477 511 ntBASIC16.67■□□□□ 0.26
TRAV8-2A0A0B4J237 AL451085.2-201ENST00000605085 799 ntBASIC16.67■□□□□ 0.26
TRAV8-2A0A0B4J237 NKILA-201ENST00000613231 537 ntTSL 4 BASIC16.67■□□□□ 0.26
TRAV8-2A0A0B4J237 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV8-2A0A0B4J237 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV8-2A0A0B4J237 AC080038.3-201ENST00000623346 1952 ntBASIC16.67■□□□□ 0.26
TRAV8-2A0A0B4J237 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TRAV8-2A0A0B4J237 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV8-2A0A0B4J237 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV8-2A0A0B4J237 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV8-2A0A0B4J237 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
TRAV8-2A0A0B4J237 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV8-2A0A0B4J237 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC16.67■□□□□ 0.26
TRAV8-2A0A0B4J237 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV8-2A0A0B4J237 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC16.66■□□□□ 0.26
TRAV8-2A0A0B4J237 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC16.66■□□□□ 0.26
TRAV8-2A0A0B4J237 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV8-2A0A0B4J237 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TRAV8-2A0A0B4J237 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV8-2A0A0B4J237 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC16.66■□□□□ 0.26
TRAV8-2A0A0B4J237 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV8-2A0A0B4J237 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
TRAV8-2A0A0B4J237 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV8-2A0A0B4J237 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TRAV8-2A0A0B4J237 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV8-2A0A0B4J237 AC010997.5-201ENST00000609182 354 ntBASIC16.66■□□□□ 0.26
TRAV8-2A0A0B4J237 EXOG-217ENST00000630638 197 ntTSL 5 BASIC16.66■□□□□ 0.26
TRAV8-2A0A0B4J237 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV8-2A0A0B4J237 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV8-2A0A0B4J237 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
TRAV8-2A0A0B4J237 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV8-2A0A0B4J237 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV8-2A0A0B4J237 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV8-2A0A0B4J237 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV8-2A0A0B4J237 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC16.65■□□□□ 0.26
TRAV8-2A0A0B4J237 TFPT-201ENST00000391757 774 ntTSL 5 BASIC16.65■□□□□ 0.26
TRAV8-2A0A0B4J237 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV8-2A0A0B4J237 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV8-2A0A0B4J237 TSPY9P-201ENST00000440215 945 ntBASIC16.65■□□□□ 0.26
TRAV8-2A0A0B4J237 TSPY11P-201ENST00000442607 1045 ntBASIC16.65■□□□□ 0.26
TRAV8-2A0A0B4J237 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC16.65■□□□□ 0.26
TRAV8-2A0A0B4J237 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV8-2A0A0B4J237 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV8-2A0A0B4J237 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV8-2A0A0B4J237 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
TRAV8-2A0A0B4J237 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TRAV8-2A0A0B4J237 CLDN5-201ENST00000403084 2357 ntBASIC16.65■□□□□ 0.26
TRAV8-2A0A0B4J237 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV8-2A0A0B4J237 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TRAV8-2A0A0B4J237 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC16.65■□□□□ 0.26
TRAV8-2A0A0B4J237 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV8-2A0A0B4J237 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TRAV8-2A0A0B4J237 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
TRAV8-2A0A0B4J237 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
TRAV8-2A0A0B4J237 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
TRAV8-2A0A0B4J237 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
TRAV8-2A0A0B4J237 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV8-2A0A0B4J237 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV8-2A0A0B4J237 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV8-2A0A0B4J237 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TRAV8-2A0A0B4J237 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV8-2A0A0B4J237 LSM4-201ENST00000252816 986 ntTSL 2 BASIC16.64■□□□□ 0.25
TRAV8-2A0A0B4J237 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC16.64■□□□□ 0.25
TRAV8-2A0A0B4J237 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
TRAV8-2A0A0B4J237 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
TRAV8-2A0A0B4J237 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV8-2A0A0B4J237 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV8-2A0A0B4J237 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TRAV8-2A0A0B4J237 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV8-2A0A0B4J237 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV8-2A0A0B4J237 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV8-2A0A0B4J237 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TRAV8-2A0A0B4J237 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
TRAV8-2A0A0B4J237 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC16.63■□□□□ 0.25
TRAV8-2A0A0B4J237 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV8-2A0A0B4J237 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV8-2A0A0B4J237 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV8-2A0A0B4J237 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
TRAV8-2A0A0B4J237 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV8-2A0A0B4J237 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV8-2A0A0B4J237 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV8-2A0A0B4J237 AC009086.3-201ENST00000623486 1008 ntBASIC16.63■□□□□ 0.25
TRAV8-2A0A0B4J237 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC16.63■□□□□ 0.25
TRAV8-2A0A0B4J237 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV8-2A0A0B4J237 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TRAV8-2A0A0B4J237 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV8-2A0A0B4J237 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV8-2A0A0B4J237 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC16.63■□□□□ 0.25
TRAV8-2A0A0B4J237 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC16.62■□□□□ 0.25
TRAV8-2A0A0B4J237 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC16.62■□□□□ 0.25
TRAV8-2A0A0B4J237 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV8-2A0A0B4J237 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms