Protein–RNA interactions for Protein: A0A0A6YYJ0

MSANTD3-TMEFF1, Protein MSANTD3-TMEFF1, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSANTD3-TMEFF1A0A0A6YYJ0 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
MSANTD3-TMEFF1A0A0A6YYJ0 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.9■■□□□ 1.1
MSANTD3-TMEFF1A0A0A6YYJ0 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
MSANTD3-TMEFF1A0A0A6YYJ0 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
MSANTD3-TMEFF1A0A0A6YYJ0 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
MSANTD3-TMEFF1A0A0A6YYJ0 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 AL109923.1-201ENST00000618799 583 ntBASIC21.89■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.89■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.88■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.88■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.88■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.87■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.87■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.87■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.87■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.87■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.86■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.86■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.86■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 SMUG1P1-201ENST00000590640 811 ntBASIC21.86■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 AC011767.1-201ENST00000617410 1153 ntBASIC21.86■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 AC068587.7-201ENST00000641602 218 ntBASIC21.86■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.86■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 AC142381.3-201ENST00000568208 1670 ntBASIC21.85■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.85■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.85■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.85■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.85■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.85■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 AC079630.1-202ENST00000618127 1840 ntBASIC21.85■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.84■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.84■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.84■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 AC010141.3-201ENST00000456659 717 ntBASIC21.84■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.84■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.84■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.84■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.84■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 AC087239.1-201ENST00000622671 572 ntBASIC21.84■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 ABHD17AP1-201ENST00000358206 933 ntBASIC21.83■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.83■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 NCF1B-203ENST00000435988 1254 ntBASIC21.83■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.83■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.83■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.83■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.83■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 ESRRAP2-201ENST00000418437 1549 ntBASIC21.83■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
MSANTD3-TMEFF1A0A0A6YYJ0 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
MSANTD3-TMEFF1A0A0A6YYJ0 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms