Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC13.97□□□□□ -0.17
O00370 EEF2KMT-201ENST00000427587 2390 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
O00370 COPS5-203ENST00000517736 1621 ntTSL 5 BASIC13.97□□□□□ -0.17
O00370 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
O00370 AP1M1-203ENST00000444449 2311 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
O00370 GNG4-201ENST00000366597 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
O00370 GMPR2-224ENST00000559910 1562 ntTSL 5 BASIC13.97□□□□□ -0.17
O00370 DGKA-202ENST00000394147 2770 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
O00370 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
O00370 HOXB13-201ENST00000290295 3467 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
O00370 TUBD1-202ENST00000340993 1769 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
O00370 SLC9A3P3-201ENST00000457608 2229 ntBASIC13.97□□□□□ -0.17
O00370 MYL7-201ENST00000223364 612 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
O00370 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
O00370 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
O00370 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
O00370 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
O00370 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
O00370 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
O00370 NRADDP-201ENST00000437305 691 ntBASIC13.97□□□□□ -0.17
O00370 HNRNPA3P12-201ENST00000437410 1063 ntBASIC13.97□□□□□ -0.17
O00370 RPSAP69-201ENST00000445739 546 ntTSL 4 BASIC13.97□□□□□ -0.17
O00370 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC13.97□□□□□ -0.17
O00370 AC234582.2-201ENST00000455788 568 ntTSL 3 BASIC13.97□□□□□ -0.17
O00370 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC13.97□□□□□ -0.17
O00370 BCL2L12P1-201ENST00000508390 733 ntBASIC13.97□□□□□ -0.17
O00370 KIAA1191-210ENST00000510164 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
O00370 PARP8-218ENST00000513738 596 ntTSL 4 BASIC13.97□□□□□ -0.17
O00370 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC13.97□□□□□ -0.17
O00370 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC13.97□□□□□ -0.17
O00370 AC109597.2-201ENST00000569407 927 ntTSL 3 BASIC13.97□□□□□ -0.17
O00370 AC090282.1-201ENST00000572821 534 ntTSL 3 BASIC13.97□□□□□ -0.17
O00370 RN7SL605P-201ENST00000577229 281 ntBASIC13.97□□□□□ -0.17
O00370 RPSAP67-201ENST00000584105 862 ntBASIC13.97□□□□□ -0.17
O00370 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC13.97□□□□□ -0.17
O00370 ABCB9-211ENST00000540285 3330 ntTSL 2 BASIC13.97□□□□□ -0.17
O00370 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
O00370 ELOVL6-201ENST00000302274 3090 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
O00370 ITFG2-201ENST00000228799 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
O00370 AL356966.1-201ENST00000454752 2367 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
O00370 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
O00370 KIF9-207ENST00000444589 2791 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
O00370 KDM2B-219ENST00000611216 3434 ntTSL 5 BASIC13.97□□□□□ -0.17
O00370 TMOD1-202ENST00000375175 2516 ntTSL 2 BASIC13.97□□□□□ -0.17
O00370 INPP5J-208ENST00000412277 3512 ntTSL 2 BASIC13.97□□□□□ -0.17
O00370 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
O00370 SPINT1-201ENST00000344051 3056 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
O00370 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
O00370 IP6K3-201ENST00000293756 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
O00370 GALT-201ENST00000378842 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
O00370 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
O00370 TACC1-208ENST00000520340 1976 ntTSL 5 BASIC13.96□□□□□ -0.17
O00370 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC13.96□□□□□ -0.17
O00370 TTN-AS1-264ENST00000627564 1319 ntTSL 5 BASIC13.96□□□□□ -0.17
O00370 GSDMB-201ENST00000309481 1500 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
O00370 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC13.96□□□□□ -0.17
O00370 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
O00370 FAM114A2-211ENST00000520667 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
O00370 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
O00370 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
O00370 EPB41L2-205ENST00000445890 3677 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
O00370 C12orf74-201ENST00000397833 1856 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
O00370 PPP1R11-204ENST00000376769 1689 ntTSL 2 BASIC13.96□□□□□ -0.17
O00370 ARCN1-204ENST00000534182 1669 ntTSL 5 BASIC13.96□□□□□ -0.17
O00370 TIMP1-201ENST00000218388 892 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
O00370 ULBP3-201ENST00000367339 988 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
O00370 TIMP1-202ENST00000377017 626 ntTSL 2 BASIC13.96□□□□□ -0.17
O00370 ARAF-202ENST00000377039 1271 ntTSL 2 BASIC13.96□□□□□ -0.17
O00370 IGLJ1-201ENST00000390320 127 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
O00370 PSMD4P1-201ENST00000433951 1109 ntBASIC13.96□□□□□ -0.17
O00370 TONSL-AS1-201ENST00000442850 428 ntTSL 5 BASIC13.96□□□□□ -0.17
O00370 LINC01428-201ENST00000449581 874 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
O00370 AC025594.1-201ENST00000469533 543 ntBASIC13.96□□□□□ -0.17
O00370 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC13.96□□□□□ -0.17
O00370 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC13.96□□□□□ -0.17
O00370 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
O00370 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC13.96□□□□□ -0.17
O00370 AC021146.12-201ENST00000608365 477 ntTSL 2 BASIC13.96□□□□□ -0.17
O00370 AC010531.8-201ENST00000623341 685 ntBASIC13.96□□□□□ -0.17
O00370 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
O00370 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
O00370 REXO5-208ENST00000564274 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
O00370 ZNF287-201ENST00000395824 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
O00370 FGFR1-207ENST00000397103 2953 ntTSL 5 BASIC13.96□□□□□ -0.17
O00370 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
O00370 MESD-201ENST00000261758 4264 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
O00370 ITGAL-203ENST00000433423 1416 ntTSL 2 BASIC13.96□□□□□ -0.18
O00370 TCP1-215ENST00000544255 1403 ntTSL 5 BASIC13.96□□□□□ -0.18
O00370 FLJ30679-201ENST00000624773 1980 ntBASIC13.96□□□□□ -0.18
O00370 NR1H3-217ENST00000467728 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
O00370 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
O00370 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
O00370 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
O00370 LGR5-202ENST00000536515 2664 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
O00370 IQCB1-202ENST00000349820 1919 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
O00370 DDX11L2-201ENST00000437401 1398 ntBASIC13.96□□□□□ -0.18
O00370 PITPNB-201ENST00000320996 2826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
O00370 ABLIM3-203ENST00000356541 2290 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
O00370 ABLIM3-211ENST00000517451 2287 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
O00370 MB21D1-201ENST00000370315 3182 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms