Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
MTHFRP42898 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MTHFRP42898 HNRNPL-210ENST00000600873 1633 ntTSL 5 BASIC13.69□□□□□ -0.22
MTHFRP42898 BEND3P3-201ENST00000611030 2440 ntBASIC13.69□□□□□ -0.22
MTHFRP42898 CPA5-203ENST00000461828 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MTHFRP42898 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC13.69□□□□□ -0.22
MTHFRP42898 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MTHFRP42898 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC13.69□□□□□ -0.22
MTHFRP42898 PI4KAP2-201ENST00000360806 2080 ntBASIC13.69□□□□□ -0.22
MTHFRP42898 TPM3-204ENST00000323144 1088 ntTSL 2 BASIC13.69□□□□□ -0.22
MTHFRP42898 RNA5SP248-201ENST00000365602 127 ntBASIC13.69□□□□□ -0.22
MTHFRP42898 VGLL1-201ENST00000370634 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MTHFRP42898 COQ4-202ENST00000372875 928 ntTSL 2 BASIC13.69□□□□□ -0.22
MTHFRP42898 AL049792.1-201ENST00000424708 1262 ntBASIC13.69□□□□□ -0.22
MTHFRP42898 POU5F1-202ENST00000441888 1055 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
MTHFRP42898 AC116347.1-201ENST00000442824 720 ntBASIC13.69□□□□□ -0.22
MTHFRP42898 AC114781.1-201ENST00000450559 1028 ntBASIC13.69□□□□□ -0.22
MTHFRP42898 PRKRIP1-202ENST00000462601 884 ntTSL 2 BASIC13.69□□□□□ -0.22
MTHFRP42898 GOSR1-205ENST00000467337 1011 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
MTHFRP42898 KRT18P63-201ENST00000505463 979 ntBASIC13.69□□□□□ -0.22
MTHFRP42898 SCOC-209ENST00000512749 841 ntAPPRIS ALT1 TSL 3 BASIC13.69□□□□□ -0.22
MTHFRP42898 AP001979.2-201ENST00000526254 975 ntTSL 5 BASIC13.69□□□□□ -0.22
MTHFRP42898 ROM1-205ENST00000534093 862 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
MTHFRP42898 AL513165.2-203ENST00000537239 717 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
MTHFRP42898 AC025419.1-201ENST00000537250 690 ntTSL 3 BASIC13.69□□□□□ -0.22
MTHFRP42898 FP325317.1-201ENST00000539936 1042 ntBASIC13.69□□□□□ -0.22
MTHFRP42898 SLC25A3-212ENST00000549338 1285 ntAPPRIS ALT1 TSL 3 BASIC13.69□□□□□ -0.22
MTHFRP42898 AC106782.3-201ENST00000563429 258 ntBASIC13.69□□□□□ -0.22
MTHFRP42898 AL390726.3-201ENST00000567428 635 ntTSL 5 BASIC13.69□□□□□ -0.22
MTHFRP42898 MIR22HG-206ENST00000573127 899 ntTSL 3 BASIC13.69□□□□□ -0.22
MTHFRP42898 AL645940.1-201ENST00000606432 594 ntTSL 2 BASIC13.69□□□□□ -0.22
MTHFRP42898 AC090093.1-201ENST00000611315 271 ntBASIC13.69□□□□□ -0.22
MTHFRP42898 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MTHFRP42898 ZNF582-201ENST00000301310 2824 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MTHFRP42898 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
MTHFRP42898 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MTHFRP42898 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
MTHFRP42898 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MTHFRP42898 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC13.69□□□□□ -0.22
MTHFRP42898 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
MTHFRP42898 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MTHFRP42898 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
MTHFRP42898 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MTHFRP42898 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MTHFRP42898 BSCL2-203ENST00000360796 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
MTHFRP42898 FMR1-218ENST00000621447 1832 ntTSL 3 BASIC13.69□□□□□ -0.22
MTHFRP42898 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC13.69□□□□□ -0.22
MTHFRP42898 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC13.69□□□□□ -0.22
MTHFRP42898 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
MTHFRP42898 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
MTHFRP42898 ZNF493-208ENST00000599461 1769 ntBASIC13.68□□□□□ -0.22
MTHFRP42898 GPN1-211ENST00000610189 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
MTHFRP42898 AC073862.3-201ENST00000624597 1648 ntBASIC13.68□□□□□ -0.22
MTHFRP42898 ST3GAL3-202ENST00000330208 1479 ntTSL 5 BASIC13.68□□□□□ -0.22
MTHFRP42898 SH3GLB2-206ENST00000417224 1468 ntTSL 5 BASIC13.68□□□□□ -0.22
MTHFRP42898 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
MTHFRP42898 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
MTHFRP42898 AL445209.1-201ENST00000607269 3491 ntBASIC13.68□□□□□ -0.22
MTHFRP42898 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
MTHFRP42898 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
MTHFRP42898 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC13.68□□□□□ -0.22
MTHFRP42898 PARVA-201ENST00000334956 4458 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
MTHFRP42898 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC13.68□□□□□ -0.22
MTHFRP42898 ZNF101-203ENST00000415784 1552 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
MTHFRP42898 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
MTHFRP42898 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
MTHFRP42898 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
MTHFRP42898 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
MTHFRP42898 KRTAP4-6-201ENST00000345847 1055 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
MTHFRP42898 GSTM1-204ENST00000369823 852 ntTSL 3 BASIC13.68□□□□□ -0.22
MTHFRP42898 SUSD3-201ENST00000375469 1114 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
MTHFRP42898 MRPL36-201ENST00000382647 587 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
MTHFRP42898 SMUG1-213ENST00000506595 712 ntTSL 5 BASIC13.68□□□□□ -0.22
MTHFRP42898 BCRP5-201ENST00000514371 253 ntBASIC13.68□□□□□ -0.22
MTHFRP42898 AC124242.1-203ENST00000517747 817 ntTSL 3 BASIC13.68□□□□□ -0.22
MTHFRP42898 VEGFA-224ENST00000523873 784 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
MTHFRP42898 AC004923.1-201ENST00000527543 776 ntTSL 5 BASIC13.68□□□□□ -0.22
MTHFRP42898 FOS-205ENST00000555242 629 ntTSL 2 BASIC13.68□□□□□ -0.22
MTHFRP42898 AC007728.1-202ENST00000564510 787 ntTSL 3 BASIC13.68□□□□□ -0.22
MTHFRP42898 NPLOC4-214ENST00000573876 560 ntTSL 4 BASIC13.68□□□□□ -0.22
MTHFRP42898 AC100788.1-201ENST00000591108 945 ntTSL 5 BASIC13.68□□□□□ -0.22
MTHFRP42898 FAM69A-204ENST00000615519 865 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
MTHFRP42898 C2orf27AP1-201ENST00000618128 586 ntBASIC13.68□□□□□ -0.22
MTHFRP42898 CNOT4-204ENST00000414802 1687 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
MTHFRP42898 TRIM39-RPP21-201ENST00000623385 1698 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
MTHFRP42898 CDC20P1-201ENST00000488829 1500 ntBASIC13.68□□□□□ -0.22
MTHFRP42898 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
MTHFRP42898 OPRM1-210ENST00000452687 1352 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
MTHFRP42898 RHPN1-AS1-201ENST00000518049 1918 ntBASIC13.68□□□□□ -0.22
MTHFRP42898 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
MTHFRP42898 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
MTHFRP42898 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
MTHFRP42898 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
MTHFRP42898 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
MTHFRP42898 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
MTHFRP42898 ANP32B-201ENST00000339399 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MTHFRP42898 CEBPZOS-203ENST00000397226 1499 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
MTHFRP42898 BX088651.4-202ENST00000428895 1479 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
MTHFRP42898 SERPINI1-202ENST00000446050 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MTHFRP42898 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms