Protein–RNA interactions for Protein: Q0VF96

CGNL1, Cingulin-like protein 1, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGNL1Q0VF96 LSM8-201ENST00000249299 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CGNL1Q0VF96 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CGNL1Q0VF96 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
CGNL1Q0VF96 BNIP1-203ENST00000352523 1143 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CGNL1Q0VF96 NPPB-201ENST00000376468 694 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CGNL1Q0VF96 FAM9C-202ENST00000380625 1122 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CGNL1Q0VF96 YIPF7-202ENST00000415895 1196 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CGNL1Q0VF96 CPSF4-206ENST00000441580 942 ntTSL 2 BASIC17.66■□□□□ 0.42
CGNL1Q0VF96 PLA2G15-203ENST00000444212 943 ntTSL 2 BASIC17.66■□□□□ 0.42
CGNL1Q0VF96 RHOQP2-201ENST00000449922 579 ntBASIC17.66■□□□□ 0.42
CGNL1Q0VF96 RN7SKP195-201ENST00000516587 303 ntBASIC17.66■□□□□ 0.42
CGNL1Q0VF96 AC073610.2-201ENST00000537495 406 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CGNL1Q0VF96 LINC00643-202ENST00000553426 526 ntTSL 3 BASIC17.66■□□□□ 0.42
CGNL1Q0VF96 TEX38-204ENST00000564373 637 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CGNL1Q0VF96 AC092073.1-202ENST00000606020 653 ntTSL 3 BASIC17.66■□□□□ 0.42
CGNL1Q0VF96 OR4C3-202ENST00000611380 597 ntBASIC17.66■□□□□ 0.42
CGNL1Q0VF96 AL137028.2-201ENST00000614601 256 ntBASIC17.66■□□□□ 0.42
CGNL1Q0VF96 HCN3-201ENST00000368358 3718 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CGNL1Q0VF96 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CGNL1Q0VF96 AOC4P-203ENST00000566825 2289 ntBASIC17.66■□□□□ 0.42
CGNL1Q0VF96 GYG2-204ENST00000381163 3393 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CGNL1Q0VF96 HK3-201ENST00000292432 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CGNL1Q0VF96 VENTXP1-201ENST00000569334 2716 ntBASIC17.65■□□□□ 0.42
CGNL1Q0VF96 ATF6B-209ENST00000375201 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CGNL1Q0VF96 CYP4F12-201ENST00000324632 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CGNL1Q0VF96 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
CGNL1Q0VF96 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC17.65■□□□□ 0.42
CGNL1Q0VF96 NUB1-212ENST00000568733 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CGNL1Q0VF96 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CGNL1Q0VF96 FAM27E3-201ENST00000418795 1593 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CGNL1Q0VF96 PRDM11-204ENST00000530656 1536 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CGNL1Q0VF96 FAM95B1-211ENST00000592053 1541 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CGNL1Q0VF96 AL669942.1-203ENST00000610972 1541 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CGNL1Q0VF96 AC024560.1-201ENST00000424493 1471 ntTSL 3 BASIC17.65■□□□□ 0.42
CGNL1Q0VF96 ZNF143-203ENST00000396602 2947 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CGNL1Q0VF96 HEBP1-203ENST00000536942 2056 ntTSL 2 BASIC17.65■□□□□ 0.42
CGNL1Q0VF96 OPRM1-210ENST00000452687 1352 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CGNL1Q0VF96 C2-209ENST00000452323 1999 ntTSL 2 BASIC17.65■□□□□ 0.42
CGNL1Q0VF96 PPFIBP1-215ENST00000542629 3208 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CGNL1Q0VF96 IL37-204ENST00000352179 709 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CGNL1Q0VF96 TMEM79-202ENST00000357501 975 ntTSL 3 BASIC17.65■□□□□ 0.42
CGNL1Q0VF96 PARK7-204ENST00000377493 795 ntTSL 2 BASIC17.65■□□□□ 0.42
CGNL1Q0VF96 CBR3-AS1-202ENST00000427491 741 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CGNL1Q0VF96 SAP18P2-201ENST00000434334 459 ntBASIC17.65■□□□□ 0.42
CGNL1Q0VF96 PRSS45-201ENST00000442359 687 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CGNL1Q0VF96 LINC01875-201ENST00000454477 660 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CGNL1Q0VF96 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC17.65■□□□□ 0.42
CGNL1Q0VF96 VEGFA-224ENST00000523873 784 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CGNL1Q0VF96 DLX6-203ENST00000555308 666 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CGNL1Q0VF96 USP32P3-202ENST00000583574 611 ntTSL 3 BASIC17.65■□□□□ 0.42
CGNL1Q0VF96 FXYD3-206ENST00000603524 742 ntTSL 3 BASIC17.65■□□□□ 0.42
CGNL1Q0VF96 CBR3-AS1-207ENST00000608641 777 ntTSL 5 BASIC17.65■□□□□ 0.42
CGNL1Q0VF96 Metazoa_SRP.173-201ENST00000614020 273 ntBASIC17.65■□□□□ 0.42
CGNL1Q0VF96 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CGNL1Q0VF96 MLX-203ENST00000435881 2428 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CGNL1Q0VF96 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CGNL1Q0VF96 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CGNL1Q0VF96 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CGNL1Q0VF96 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CGNL1Q0VF96 DMBT1P1-203ENST00000636837 4628 ntBASIC17.65■□□□□ 0.42
CGNL1Q0VF96 SQSTM1-201ENST00000360718 2253 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CGNL1Q0VF96 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.42
CGNL1Q0VF96 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
CGNL1Q0VF96 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CGNL1Q0VF96 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CGNL1Q0VF96 AL031719.1-201ENST00000623365 2587 ntBASIC17.64■□□□□ 0.41
CGNL1Q0VF96 PKMP1-201ENST00000455804 1523 ntBASIC17.64■□□□□ 0.41
CGNL1Q0VF96 FMO1-203ENST00000402921 2003 ntTSL 2 BASIC17.64■□□□□ 0.41
CGNL1Q0VF96 CPEB1-212ENST00000616959 2009 ntTSL 2 BASIC17.64■□□□□ 0.41
CGNL1Q0VF96 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC17.64■□□□□ 0.41
CGNL1Q0VF96 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CGNL1Q0VF96 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CGNL1Q0VF96 SCARA5-202ENST00000380385 2934 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CGNL1Q0VF96 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC17.64■□□□□ 0.41
CGNL1Q0VF96 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CGNL1Q0VF96 BCO2-202ENST00000361053 1868 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CGNL1Q0VF96 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
CGNL1Q0VF96 RNF113A-201ENST00000371442 1353 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CGNL1Q0VF96 MICA-210ENST00000616296 2260 ntTSL 5 BASIC17.64■□□□□ 0.41
CGNL1Q0VF96 FAM71E2-201ENST00000424985 3191 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CGNL1Q0VF96 Z82170.1-201ENST00000625081 3192 ntBASIC17.64■□□□□ 0.41
CGNL1Q0VF96 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CGNL1Q0VF96 AC116903.2-201ENST00000561674 1304 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CGNL1Q0VF96 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CGNL1Q0VF96 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CGNL1Q0VF96 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
CGNL1Q0VF96 MED27-202ENST00000357028 1281 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CGNL1Q0VF96 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC17.64■□□□□ 0.41
CGNL1Q0VF96 FUNDC1-201ENST00000378045 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CGNL1Q0VF96 FTH1P18-201ENST00000412071 549 ntBASIC17.64■□□□□ 0.41
CGNL1Q0VF96 Z95624.1-201ENST00000413528 628 ntTSL 5 BASIC17.64■□□□□ 0.41
CGNL1Q0VF96 AC079325.1-201ENST00000430386 857 ntBASIC17.64■□□□□ 0.41
CGNL1Q0VF96 BCL2L2-PABPN1-201ENST00000553781 1241 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CGNL1Q0VF96 AC136698.1-201ENST00000558110 546 ntTSL 4 BASIC17.64■□□□□ 0.41
CGNL1Q0VF96 AC048382.4-201ENST00000559065 546 ntTSL 4 BASIC17.64■□□□□ 0.41
CGNL1Q0VF96 NFATC2IP-206ENST00000568148 1157 ntTSL 2 BASIC17.64■□□□□ 0.41
CGNL1Q0VF96 DSCR9-203ENST00000581640 472 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CGNL1Q0VF96 LINC00969-241ENST00000600527 852 ntTSL 5 BASIC17.64■□□□□ 0.41
CGNL1Q0VF96 THEGL-202ENST00000512175 1650 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CGNL1Q0VF96 FAM156A-203ENST00000611661 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms