Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 AC138305.1-201ENST00000568932 561 ntTSL 5 BASIC13.71□□□□□ -0.21
MTHFRP42898 C17orf62-234ENST00000584503 584 ntTSL 2 BASIC13.71□□□□□ -0.21
MTHFRP42898 HCG18-241ENST00000602290 821 ntTSL 2 BASIC13.71□□□□□ -0.21
MTHFRP42898 AC021321.1-201ENST00000607397 1113 ntBASIC13.71□□□□□ -0.21
MTHFRP42898 RN7SL827P-201ENST00000607480 288 ntBASIC13.71□□□□□ -0.21
MTHFRP42898 SLC50A1-214ENST00000622581 1245 ntTSL 5 BASIC13.71□□□□□ -0.21
MTHFRP42898 RPS9-213ENST00000626547 476 ntTSL 2 BASIC13.71□□□□□ -0.21
MTHFRP42898 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
MTHFRP42898 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
MTHFRP42898 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC13.71□□□□□ -0.21
MTHFRP42898 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC13.71□□□□□ -0.21
MTHFRP42898 ANKDD1A-207ENST00000496660 1477 ntTSL 2 BASIC13.71□□□□□ -0.21
MTHFRP42898 Z98259.1-201ENST00000564261 1697 ntBASIC13.71□□□□□ -0.21
MTHFRP42898 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
MTHFRP42898 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
MTHFRP42898 LAMP2-201ENST00000200639 1867 ntAPPRIS P5 TSL 1 (best) BASIC13.71□□□□□ -0.21
MTHFRP42898 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
MTHFRP42898 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
MTHFRP42898 KIAA0391-211ENST00000605870 1406 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
MTHFRP42898 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
MTHFRP42898 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
MTHFRP42898 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC13.71□□□□□ -0.22
MTHFRP42898 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC13.71□□□□□ -0.22
MTHFRP42898 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
MTHFRP42898 ZFAND1-201ENST00000220669 1798 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
MTHFRP42898 ZFAND1-221ENST00000523096 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
MTHFRP42898 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
MTHFRP42898 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
MTHFRP42898 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC13.7□□□□□ -0.22
MTHFRP42898 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
MTHFRP42898 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
MTHFRP42898 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
MTHFRP42898 ECM1-203ENST00000369049 1925 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
MTHFRP42898 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC13.7□□□□□ -0.22
MTHFRP42898 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
MTHFRP42898 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
MTHFRP42898 STK3-218ENST00000617590 2485 ntTSL 5 BASIC13.7□□□□□ -0.22
MTHFRP42898 AHCYP7-201ENST00000560847 1308 ntBASIC13.7□□□□□ -0.22
MTHFRP42898 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
MTHFRP42898 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
MTHFRP42898 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
MTHFRP42898 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
MTHFRP42898 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC13.7□□□□□ -0.22
MTHFRP42898 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
MTHFRP42898 MKL1-212ENST00000618417 1842 ntTSL 5 BASIC13.7□□□□□ -0.22
MTHFRP42898 OR52N1-201ENST00000317078 963 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
MTHFRP42898 GSTK1-201ENST00000358406 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
MTHFRP42898 TACR1-202ENST00000409848 1270 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
MTHFRP42898 HNRNPA1P33-201ENST00000421426 561 ntBASIC13.7□□□□□ -0.22
MTHFRP42898 LINC01678-202ENST00000424921 475 ntTSL 3 BASIC13.7□□□□□ -0.22
MTHFRP42898 AL359458.1-201ENST00000430821 400 ntTSL 3 BASIC13.7□□□□□ -0.22
MTHFRP42898 AC053503.4-201ENST00000431827 224 ntTSL 5 BASIC13.7□□□□□ -0.22
MTHFRP42898 AC002066.1-201ENST00000446355 514 ntTSL 5 BASIC13.7□□□□□ -0.22
MTHFRP42898 AL583804.1-201ENST00000448643 810 ntTSL 3 BASIC13.7□□□□□ -0.22
MTHFRP42898 SMCR2-201ENST00000456090 564 ntTSL 2 BASIC13.7□□□□□ -0.22
MTHFRP42898 RN7SL363P-201ENST00000482412 273 ntBASIC13.7□□□□□ -0.22
MTHFRP42898 AC022447.2-201ENST00000509750 543 ntTSL 3 BASIC13.7□□□□□ -0.22
MTHFRP42898 RPS23-205ENST00000510019 1019 ntTSL 4 BASIC13.7□□□□□ -0.22
MTHFRP42898 AC100797.1-201ENST00000520760 316 ntTSL 2 BASIC13.7□□□□□ -0.22
MTHFRP42898 AC107959.3-201ENST00000520840 484 ntTSL 5 BASIC13.7□□□□□ -0.22
MTHFRP42898 C8orf37-AS1-203ENST00000521905 617 ntTSL 5 BASIC13.7□□□□□ -0.22
MTHFRP42898 AP001922.5-201ENST00000527803 651 ntTSL 4 BASIC13.7□□□□□ -0.22
MTHFRP42898 CCDC42-202ENST00000539522 1087 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
MTHFRP42898 GABARAPL2-203ENST00000565057 571 ntTSL 2 BASIC13.7□□□□□ -0.22
MTHFRP42898 AC022211.3-201ENST00000584339 400 ntTSL 3 BASIC13.7□□□□□ -0.22
MTHFRP42898 AC048380.1-201ENST00000589818 465 ntTSL 3 BASIC13.7□□□□□ -0.22
MTHFRP42898 AC026304.1-201ENST00000597953 561 ntBASIC13.7□□□□□ -0.22
MTHFRP42898 ZNF677-207ENST00000598806 701 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
MTHFRP42898 UBA52-214ENST00000599595 692 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
MTHFRP42898 TNNI2-206ENST00000617947 699 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
MTHFRP42898 MIF4GD-214ENST00000618645 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
MTHFRP42898 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
MTHFRP42898 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC13.7□□□□□ -0.22
MTHFRP42898 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
MTHFRP42898 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
MTHFRP42898 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
MTHFRP42898 RABL2B-203ENST00000395591 1987 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
MTHFRP42898 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
MTHFRP42898 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
MTHFRP42898 AP001258.1-201ENST00000501817 2110 ntTSL 5 BASIC13.7□□□□□ -0.22
MTHFRP42898 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC13.7□□□□□ -0.22
MTHFRP42898 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
MTHFRP42898 DNPEP-205ENST00000373972 1578 ntTSL 2 BASIC13.7□□□□□ -0.22
MTHFRP42898 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
MTHFRP42898 AC020741.1-201ENST00000381217 2079 ntTSL 2 BASIC13.7□□□□□ -0.22
MTHFRP42898 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
MTHFRP42898 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
MTHFRP42898 MAGEB1-201ENST00000378981 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
MTHFRP42898 PRAMEF25-201ENST00000614839 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
MTHFRP42898 PRAMEF26-201ENST00000624207 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
MTHFRP42898 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
MTHFRP42898 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
MTHFRP42898 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
MTHFRP42898 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
MTHFRP42898 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
MTHFRP42898 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC13.69□□□□□ -0.22
MTHFRP42898 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
MTHFRP42898 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MTHFRP42898 RAB8A-202ENST00000586682 1315 ntTSL 2 BASIC13.69□□□□□ -0.22
MTHFRP42898 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms