Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SLC1A1P43005 SDCBP2P1-201ENST00000416115 614 ntBASIC13.79□□□□□ -0.2
SLC1A1P43005 IGHV3-43-201ENST00000434710 434 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
SLC1A1P43005 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC13.79□□□□□ -0.2
SLC1A1P43005 HCG2040054-202ENST00000439182 362 ntTSL 3 BASIC13.79□□□□□ -0.2
SLC1A1P43005 AC092638.2-201ENST00000441105 947 ntBASIC13.79□□□□□ -0.2
SLC1A1P43005 RN7SL351P-201ENST00000469306 248 ntBASIC13.79□□□□□ -0.2
SLC1A1P43005 TMCO5B-205ENST00000530020 894 ntBASIC13.79□□□□□ -0.2
SLC1A1P43005 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SLC1A1P43005 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SLC1A1P43005 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SLC1A1P43005 GMFG-206ENST00000597595 758 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SLC1A1P43005 AC107464.3-201ENST00000609172 737 ntBASIC13.79□□□□□ -0.2
SLC1A1P43005 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC13.79□□□□□ -0.2
SLC1A1P43005 FRG2EP-201ENST00000634243 835 ntBASIC13.79□□□□□ -0.2
SLC1A1P43005 BAIAP2-AS1-202ENST00000577066 4465 ntTSL 2 BASIC13.79□□□□□ -0.2
SLC1A1P43005 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SLC1A1P43005 GRIK5-202ENST00000301218 3310 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SLC1A1P43005 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC13.79□□□□□ -0.2
SLC1A1P43005 GRIN1-205ENST00000371555 4003 ntTSL 5 BASIC13.79□□□□□ -0.2
SLC1A1P43005 PTCD2-212ENST00000543322 2029 ntTSL 2 BASIC13.79□□□□□ -0.2
SLC1A1P43005 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SLC1A1P43005 PDZRN3-205ENST00000466780 2737 ntTSL 2 BASIC13.79□□□□□ -0.2
SLC1A1P43005 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SLC1A1P43005 MOB3C-201ENST00000271139 2800 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SLC1A1P43005 TNFRSF8-203ENST00000417814 3593 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SLC1A1P43005 EPS15L1-201ENST00000248070 2924 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SLC1A1P43005 PARD6B-201ENST00000371610 4615 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SLC1A1P43005 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SLC1A1P43005 RSPO2-201ENST00000276659 3111 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SLC1A1P43005 HARS-207ENST00000504156 3334 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SLC1A1P43005 MAGEB1-202ENST00000397548 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SLC1A1P43005 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SLC1A1P43005 TBC1D3I-203ENST00000621034 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SLC1A1P43005 USP20-201ENST00000315480 4458 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SLC1A1P43005 BSDC1-201ENST00000341071 4599 ntTSL 2 BASIC13.78□□□□□ -0.2
SLC1A1P43005 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
SLC1A1P43005 C9orf3-201ENST00000277198 1966 ntTSL 2 BASIC13.78□□□□□ -0.2
SLC1A1P43005 TACC1-208ENST00000520340 1976 ntTSL 5 BASIC13.78□□□□□ -0.2
SLC1A1P43005 NCBP2L-202ENST00000639756 1953 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
SLC1A1P43005 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
SLC1A1P43005 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
SLC1A1P43005 ATAT1-202ENST00000319027 2061 ntTSL 2 BASIC13.78□□□□□ -0.2
SLC1A1P43005 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC13.78□□□□□ -0.2
SLC1A1P43005 ARHGEF1-203ENST00000354532 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SLC1A1P43005 AC092117.1-201ENST00000621230 3250 ntBASIC13.78□□□□□ -0.2
SLC1A1P43005 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
SLC1A1P43005 PTPRN2-203ENST00000389418 4706 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
SLC1A1P43005 CRHR1-206ENST00000398285 2399 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SLC1A1P43005 ANKRD36B-201ENST00000258459 5986 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
SLC1A1P43005 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
SLC1A1P43005 RNA5SP491-201ENST00000362936 118 ntBASIC13.78□□□□□ -0.2
SLC1A1P43005 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SLC1A1P43005 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC13.78□□□□□ -0.2
SLC1A1P43005 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC13.78□□□□□ -0.2
SLC1A1P43005 PSAT1P2-201ENST00000426107 972 ntBASIC13.78□□□□□ -0.2
SLC1A1P43005 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC13.78□□□□□ -0.2
SLC1A1P43005 AC098935.1-201ENST00000446057 611 ntBASIC13.78□□□□□ -0.2
SLC1A1P43005 MAGEA5-201ENST00000446757 942 ntBASIC13.78□□□□□ -0.2
SLC1A1P43005 FGFR3P1-201ENST00000449999 601 ntBASIC13.78□□□□□ -0.2
SLC1A1P43005 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC13.78□□□□□ -0.2
SLC1A1P43005 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC13.78□□□□□ -0.2
SLC1A1P43005 CDK2AP2P2-201ENST00000478512 367 ntBASIC13.78□□□□□ -0.2
SLC1A1P43005 AP002803.1-201ENST00000528836 498 ntBASIC13.78□□□□□ -0.2
SLC1A1P43005 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC13.78□□□□□ -0.2
SLC1A1P43005 RPSAP67-201ENST00000584105 862 ntBASIC13.78□□□□□ -0.2
SLC1A1P43005 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC13.78□□□□□ -0.2
SLC1A1P43005 AL353622.2-201ENST00000605846 425 ntBASIC13.78□□□□□ -0.2
SLC1A1P43005 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
SLC1A1P43005 AL021578.1-201ENST00000613646 709 ntBASIC13.78□□□□□ -0.2
SLC1A1P43005 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC13.78□□□□□ -0.2
SLC1A1P43005 AL590094.1-208ENST00000636917 627 ntTSL 5 BASIC13.78□□□□□ -0.2
SLC1A1P43005 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SLC1A1P43005 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
SLC1A1P43005 TEF-202ENST00000406644 4386 ntTSL 2 BASIC13.78□□□□□ -0.2
SLC1A1P43005 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
SLC1A1P43005 SPRYD3-204ENST00000547837 1655 ntTSL 5 BASIC13.78□□□□□ -0.2
SLC1A1P43005 CLTCL1-210ENST00000617926 1695 ntTSL 2 BASIC13.78□□□□□ -0.2
SLC1A1P43005 BMP4-205ENST00000558984 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SLC1A1P43005 SERPINB8-209ENST00000636430 1719 ntTSL 5 BASIC13.78□□□□□ -0.2
SLC1A1P43005 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SLC1A1P43005 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC13.78□□□□□ -0.2
SLC1A1P43005 C12orf56-201ENST00000333722 3936 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SLC1A1P43005 LIN28A-202ENST00000326279 4008 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SLC1A1P43005 EMBP1-203ENST00000622787 4235 ntTSL 2 BASIC13.78□□□□□ -0.2
SLC1A1P43005 ZNF555-203ENST00000591539 2270 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
SLC1A1P43005 CTAGE7P-201ENST00000435712 2436 ntBASIC13.78□□□□□ -0.2
SLC1A1P43005 VAMP7-202ENST00000286448 2646 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SLC1A1P43005 POC1B-GALNT4-202ENST00000548729 5436 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
SLC1A1P43005 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
SLC1A1P43005 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SLC1A1P43005 ZNF621-202ENST00000339296 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SLC1A1P43005 FAM184A-211ENST00000521531 3244 ntTSL 5 BASIC13.77□□□□□ -0.2
SLC1A1P43005 AL591806.3-201ENST00000289779 2096 ntAPPRIS P5 TSL 2 BASIC13.77□□□□□ -0.21
SLC1A1P43005 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SLC1A1P43005 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SLC1A1P43005 RAP1A-201ENST00000356415 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SLC1A1P43005 SQSTM1-201ENST00000360718 2253 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SLC1A1P43005 DPPA5-201ENST00000370370 679 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SLC1A1P43005 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms