Protein–RNA interactions for Protein: Q0VF96

CGNL1, Cingulin-like protein 1, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGNL1Q0VF96 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CGNL1Q0VF96 ZWINT-202ENST00000361148 807 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CGNL1Q0VF96 S100A2-202ENST00000368708 998 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CGNL1Q0VF96 RFNG-202ENST00000429557 994 ntTSL 5 BASIC17.74■□□□□ 0.43
CGNL1Q0VF96 LINC02151-201ENST00000452629 921 ntTSL 2 BASIC17.74■□□□□ 0.43
CGNL1Q0VF96 SNRPD2P2-201ENST00000473818 333 ntBASIC17.74■□□□□ 0.43
CGNL1Q0VF96 SPG20-AS1-203ENST00000493739 566 ntTSL 3 BASIC17.74■□□□□ 0.43
CGNL1Q0VF96 AP001360.1-203ENST00000524708 464 ntTSL 3 BASIC17.74■□□□□ 0.43
CGNL1Q0VF96 AC100858.2-201ENST00000531948 487 ntTSL 3 BASIC17.74■□□□□ 0.43
CGNL1Q0VF96 AL139353.1-202ENST00000547378 474 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
CGNL1Q0VF96 TSHZ3-202ENST00000558569 441 ntTSL 2 BASIC17.74■□□□□ 0.43
CGNL1Q0VF96 MIR4539-201ENST00000579784 60 ntBASIC17.74■□□□□ 0.43
CGNL1Q0VF96 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC17.74■□□□□ 0.43
CGNL1Q0VF96 AP001462.1-201ENST00000594089 452 ntBASIC17.74■□□□□ 0.43
CGNL1Q0VF96 IFITM2-205ENST00000602569 605 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CGNL1Q0VF96 FXYD3-212ENST00000605550 590 ntTSL 4 BASIC17.74■□□□□ 0.43
CGNL1Q0VF96 AL353658.2-201ENST00000629794 519 ntTSL 5 BASIC17.74■□□□□ 0.43
CGNL1Q0VF96 KRT40-202ENST00000398486 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CGNL1Q0VF96 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CGNL1Q0VF96 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CGNL1Q0VF96 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CGNL1Q0VF96 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CGNL1Q0VF96 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CGNL1Q0VF96 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CGNL1Q0VF96 CSTF2-201ENST00000372972 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CGNL1Q0VF96 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CGNL1Q0VF96 GAPDH-205ENST00000396861 1348 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CGNL1Q0VF96 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CGNL1Q0VF96 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CGNL1Q0VF96 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CGNL1Q0VF96 Z98257.2-202ENST00000641138 1548 ntBASIC17.74■□□□□ 0.43
CGNL1Q0VF96 UGT1A1-201ENST00000305208 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CGNL1Q0VF96 FSTL1-202ENST00000424703 1396 ntTSL 2 BASIC17.74■□□□□ 0.43
CGNL1Q0VF96 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CGNL1Q0VF96 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CGNL1Q0VF96 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC17.74■□□□□ 0.43
CGNL1Q0VF96 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CGNL1Q0VF96 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC17.74■□□□□ 0.43
CGNL1Q0VF96 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CGNL1Q0VF96 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CGNL1Q0VF96 GTF2A1L-201ENST00000403751 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CGNL1Q0VF96 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CGNL1Q0VF96 AC060814.4-201ENST00000594169 2163 ntBASIC17.73■□□□□ 0.43
CGNL1Q0VF96 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC17.73■□□□□ 0.43
CGNL1Q0VF96 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CGNL1Q0VF96 S100B-201ENST00000291700 877 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CGNL1Q0VF96 LINC02449-201ENST00000304751 795 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CGNL1Q0VF96 IL1F10-201ENST00000341010 1013 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CGNL1Q0VF96 PDE4DIP-202ENST00000369347 1137 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CGNL1Q0VF96 PIGL-202ENST00000395844 1257 ntTSL 5 BASIC17.73■□□□□ 0.43
CGNL1Q0VF96 FAM157A-201ENST00000437428 1141 ntTSL 3 BASIC17.73■□□□□ 0.43
CGNL1Q0VF96 AC006328.1-201ENST00000437571 379 ntBASIC17.73■□□□□ 0.43
CGNL1Q0VF96 Z82249.1-201ENST00000453866 568 ntTSL 4 BASIC17.73■□□□□ 0.43
CGNL1Q0VF96 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC17.73■□□□□ 0.43
CGNL1Q0VF96 AC011603.2-201ENST00000548149 675 ntTSL 3 BASIC17.73■□□□□ 0.43
CGNL1Q0VF96 PEX11A-204ENST00000561224 529 ntTSL 4 BASIC17.73■□□□□ 0.43
CGNL1Q0VF96 INO80E-209ENST00000567254 625 ntTSL 2 BASIC17.73■□□□□ 0.43
CGNL1Q0VF96 AC012615.6-203ENST00000590531 272 ntTSL 2 BASIC17.73■□□□□ 0.43
CGNL1Q0VF96 TUBB4A-207ENST00000596926 548 ntTSL 4 BASIC17.73■□□□□ 0.43
CGNL1Q0VF96 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC17.73■□□□□ 0.43
CGNL1Q0VF96 SERPING1-213ENST00000619430 634 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CGNL1Q0VF96 AC004147.4-201ENST00000636421 1844 ntTSL 5 BASIC17.73■□□□□ 0.43
CGNL1Q0VF96 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CGNL1Q0VF96 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
CGNL1Q0VF96 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CGNL1Q0VF96 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CGNL1Q0VF96 ANKRA2-201ENST00000296785 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CGNL1Q0VF96 KRT15-202ENST00000393974 3758 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CGNL1Q0VF96 PRIMPOL-201ENST00000314970 2289 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CGNL1Q0VF96 ANXA3-202ENST00000503570 1524 ntTSL 5 BASIC17.73■□□□□ 0.43
CGNL1Q0VF96 TFG-202ENST00000418917 1716 ntAPPRIS ALT1 TSL 3 BASIC17.73■□□□□ 0.43
CGNL1Q0VF96 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
CGNL1Q0VF96 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC17.73■□□□□ 0.43
CGNL1Q0VF96 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CGNL1Q0VF96 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CGNL1Q0VF96 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CGNL1Q0VF96 AC010182.1-201ENST00000548943 2434 ntBASIC17.73■□□□□ 0.43
CGNL1Q0VF96 RUSC1-AS1-202ENST00000446880 1836 ntTSL 2 BASIC17.73■□□□□ 0.43
CGNL1Q0VF96 ITFG1-204ENST00000544001 1849 ntTSL 2 BASIC17.73■□□□□ 0.43
CGNL1Q0VF96 CLUAP1-201ENST00000341633 1643 ntTSL 5 BASIC17.73■□□□□ 0.43
CGNL1Q0VF96 ITGAL-203ENST00000433423 1416 ntTSL 2 BASIC17.73■□□□□ 0.43
CGNL1Q0VF96 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CGNL1Q0VF96 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CGNL1Q0VF96 KIZ-208ENST00000616848 1875 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
CGNL1Q0VF96 PRKAG1-201ENST00000316299 1683 ntTSL 2 BASIC17.73■□□□□ 0.43
CGNL1Q0VF96 MSRA-202ENST00000382490 1460 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CGNL1Q0VF96 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CGNL1Q0VF96 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CGNL1Q0VF96 CSHL1-201ENST00000259003 739 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CGNL1Q0VF96 C9orf24-202ENST00000379124 648 ntTSL 3 BASIC17.72■□□□□ 0.43
CGNL1Q0VF96 DTX3L-202ENST00000383661 687 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CGNL1Q0VF96 AL121949.3-201ENST00000406684 385 ntBASIC17.72■□□□□ 0.43
CGNL1Q0VF96 AC019349.1-201ENST00000411759 476 ntTSL 3 BASIC17.72■□□□□ 0.43
CGNL1Q0VF96 KRT18P39-201ENST00000415349 1299 ntBASIC17.72■□□□□ 0.43
CGNL1Q0VF96 HNRNPA1P25-201ENST00000422644 937 ntBASIC17.72■□□□□ 0.43
CGNL1Q0VF96 CSHL1-206ENST00000450719 973 ntTSL 2 BASIC17.72■□□□□ 0.43
CGNL1Q0VF96 RPL30P11-202ENST00000509114 358 ntTSL 3 BASIC17.72■□□□□ 0.43
CGNL1Q0VF96 ISL1-203ENST00000511384 981 ntTSL 5 BASIC17.72■□□□□ 0.43
CGNL1Q0VF96 DERL1-204ENST00000519018 575 ntTSL 4 BASIC17.72■□□□□ 0.43
CGNL1Q0VF96 BLOC1S5-205ENST00000543936 368 ntTSL 2 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms