Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SCN2BO60939 CACNA1F-203ENST00000376265 6070 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SCN2BO60939 SLC36A1-201ENST00000243389 5781 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SCN2BO60939 BAIAP2-AS1-202ENST00000577066 4465 ntTSL 2 BASIC12.53□□□□□ -0.4
SCN2BO60939 RORC-201ENST00000318247 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
SCN2BO60939 PRMT5-202ENST00000324366 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SCN2BO60939 MCL1-204ENST00000620947 3626 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SCN2BO60939 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC12.53□□□□□ -0.4
SCN2BO60939 MAOA-204ENST00000542639 5438 ntTSL 2 BASIC12.53□□□□□ -0.4
SCN2BO60939 LAMB3-201ENST00000356082 4055 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SCN2BO60939 ZNF287-201ENST00000395824 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SCN2BO60939 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SCN2BO60939 AL157832.2-205ENST00000597245 1649 ntBASIC12.53□□□□□ -0.4
SCN2BO60939 PLK4-210ENST00000514379 3060 ntTSL 2 BASIC12.53□□□□□ -0.4
SCN2BO60939 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SCN2BO60939 MT1F-201ENST00000334350 690 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SCN2BO60939 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SCN2BO60939 AL662890.1-201ENST00000396818 632 ntBASIC12.53□□□□□ -0.4
SCN2BO60939 AC105935.1-203ENST00000419183 600 ntTSL 3 BASIC12.53□□□□□ -0.4
SCN2BO60939 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC12.53□□□□□ -0.4
SCN2BO60939 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC12.53□□□□□ -0.4
SCN2BO60939 VTI1BP1-201ENST00000486325 700 ntBASIC12.53□□□□□ -0.4
SCN2BO60939 RN7SL720P-201ENST00000488178 304 ntBASIC12.53□□□□□ -0.4
SCN2BO60939 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SCN2BO60939 AC113391.1-201ENST00000507236 578 ntTSL 4 BASIC12.53□□□□□ -0.4
SCN2BO60939 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC12.53□□□□□ -0.4
SCN2BO60939 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC12.53□□□□□ -0.4
SCN2BO60939 RNA5SP406-201ENST00000516106 112 ntBASIC12.53□□□□□ -0.4
SCN2BO60939 SLC25A51P3-201ENST00000521814 889 ntBASIC12.53□□□□□ -0.4
SCN2BO60939 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SCN2BO60939 NEU3-205ENST00000531619 582 ntTSL 5 BASIC12.53□□□□□ -0.4
SCN2BO60939 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC12.53□□□□□ -0.4
SCN2BO60939 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
SCN2BO60939 VENTXP3-201ENST00000546480 773 ntBASIC12.53□□□□□ -0.4
SCN2BO60939 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC12.53□□□□□ -0.4
SCN2BO60939 TCL1A-209ENST00000557043 980 ntTSL 3 BASIC12.53□□□□□ -0.4
SCN2BO60939 AC135983.4-201ENST00000564116 1262 ntBASIC12.53□□□□□ -0.4
SCN2BO60939 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC12.53□□□□□ -0.4
SCN2BO60939 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC12.53□□□□□ -0.4
SCN2BO60939 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC12.53□□□□□ -0.4
SCN2BO60939 AC005041.3-201ENST00000606287 649 ntBASIC12.53□□□□□ -0.4
SCN2BO60939 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC12.53□□□□□ -0.4
SCN2BO60939 MIR6770-3-201ENST00000616362 60 ntBASIC12.53□□□□□ -0.4
SCN2BO60939 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC12.53□□□□□ -0.4
SCN2BO60939 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
SCN2BO60939 MIR6770-2-201ENST00000618304 60 ntBASIC12.53□□□□□ -0.4
SCN2BO60939 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC12.53□□□□□ -0.4
SCN2BO60939 MIR6770-1-201ENST00000622248 60 ntBASIC12.53□□□□□ -0.4
SCN2BO60939 GGTA1P-205ENST00000495328 3478 ntTSL 2 BASIC12.53□□□□□ -0.4
SCN2BO60939 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
SCN2BO60939 ALDH1L1-205ENST00000452905 2758 ntTSL 2 BASIC12.53□□□□□ -0.4
SCN2BO60939 BORA-202ENST00000377815 1673 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
SCN2BO60939 PLA1A-206ENST00000495992 1695 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SCN2BO60939 HACD3-207ENST00000566074 1658 ntTSL 5 BASIC12.53□□□□□ -0.4
SCN2BO60939 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC12.53□□□□□ -0.4
SCN2BO60939 FAM184A-211ENST00000521531 3244 ntTSL 5 BASIC12.53□□□□□ -0.4
SCN2BO60939 COL3A1-201ENST00000304636 5543 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SCN2BO60939 MISP-201ENST00000215582 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SCN2BO60939 CFAP157-202ENST00000373295 1721 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
SCN2BO60939 MEG3-214ENST00000519709 1726 ntTSL 5 BASIC12.53□□□□□ -0.4
SCN2BO60939 LINGO1-AS1-201ENST00000558691 1720 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SCN2BO60939 AS3MT-202ENST00000615257 1723 ntTSL 5 BASIC12.53□□□□□ -0.4
SCN2BO60939 IL21R-201ENST00000337929 4849 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SCN2BO60939 CPT1C-203ENST00000392518 2910 ntAPPRIS P3 TSL 2 BASIC12.53□□□□□ -0.4
SCN2BO60939 FOXK1-201ENST00000328914 11181 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
SCN2BO60939 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SCN2BO60939 TUBB8P5-201ENST00000445286 1351 ntBASIC12.53□□□□□ -0.4
SCN2BO60939 PGAP2-204ENST00000396991 1798 ntTSL 5 BASIC12.53□□□□□ -0.4
SCN2BO60939 LDLRAD1-203ENST00000420619 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SCN2BO60939 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
SCN2BO60939 RBM15-201ENST00000369784 4244 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SCN2BO60939 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
SCN2BO60939 SNX22-201ENST00000325881 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SCN2BO60939 SLC2A9-208ENST00000506583 1927 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
SCN2BO60939 CCT8-211ENST00000540844 1927 ntTSL 2 BASIC12.52□□□□□ -0.4
SCN2BO60939 RAB8B-201ENST00000321437 4943 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SCN2BO60939 COQ5-201ENST00000288532 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SCN2BO60939 SCML1-201ENST00000380041 1997 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
SCN2BO60939 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
SCN2BO60939 INPP5J-201ENST00000331075 3347 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
SCN2BO60939 ARHGEF9-205ENST00000437457 3758 ntTSL 5 BASIC12.52□□□□□ -0.4
SCN2BO60939 ARAP3-207ENST00000626478 4928 ntTSL 5 BASIC12.52□□□□□ -0.4
SCN2BO60939 CLTCL1-210ENST00000617926 1695 ntTSL 2 BASIC12.52□□□□□ -0.4
SCN2BO60939 RNF125-201ENST00000217740 6020 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SCN2BO60939 IYD-208ENST00000500320 2158 ntTSL 2 BASIC12.52□□□□□ -0.4
SCN2BO60939 CHST4-202ENST00000539698 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SCN2BO60939 EBF2-203ENST00000520164 5145 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
SCN2BO60939 GRM2-202ENST00000395052 3151 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
SCN2BO60939 PSME3-217ENST00000622892 3183 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SCN2BO60939 AL359510.2-201ENST00000624958 2249 ntBASIC12.52□□□□□ -0.41
SCN2BO60939 MYO1C-202ENST00000361007 4734 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
SCN2BO60939 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SCN2BO60939 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SCN2BO60939 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
SCN2BO60939 HIST2H2BA-201ENST00000412169 381 ntBASIC12.52□□□□□ -0.41
SCN2BO60939 SLC25A24P2-201ENST00000415059 510 ntBASIC12.52□□□□□ -0.41
SCN2BO60939 NME6-203ENST00000415644 849 ntTSL 2 BASIC12.52□□□□□ -0.41
SCN2BO60939 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SCN2BO60939 IGHJ2P-201ENST00000454480 60 ntBASIC12.52□□□□□ -0.41
SCN2BO60939 HINT1-204ENST00000506908 681 ntTSL 2 BASIC12.52□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms