Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC11.63□□□□□ -0.55
NPIPB4C9JG80 COG4-212ENST00000564653 590 ntTSL 5 BASIC11.63□□□□□ -0.55
NPIPB4C9JG80 AC141586.1-203ENST00000567242 366 ntBASIC11.63□□□□□ -0.55
NPIPB4C9JG80 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
NPIPB4C9JG80 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC11.63□□□□□ -0.55
NPIPB4C9JG80 AC023509.4-201ENST00000602306 775 ntBASIC11.63□□□□□ -0.55
NPIPB4C9JG80 HIST1H3E-201ENST00000614911 462 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
NPIPB4C9JG80 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
NPIPB4C9JG80 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
NPIPB4C9JG80 DLL1-201ENST00000366756 3174 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
NPIPB4C9JG80 CPEB1-212ENST00000616959 2009 ntTSL 2 BASIC11.63□□□□□ -0.55
NPIPB4C9JG80 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC11.63□□□□□ -0.55
NPIPB4C9JG80 ZNF555-203ENST00000591539 2270 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
NPIPB4C9JG80 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC11.63□□□□□ -0.55
NPIPB4C9JG80 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
NPIPB4C9JG80 NRXN1-233ENST00000630543 4500 ntTSL 5 BASIC11.63□□□□□ -0.55
NPIPB4C9JG80 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
NPIPB4C9JG80 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
NPIPB4C9JG80 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
NPIPB4C9JG80 KCNT1-213ENST00000630792 3606 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
NPIPB4C9JG80 GUCY1A3-205ENST00000506455 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
NPIPB4C9JG80 BSCL2-206ENST00000405837 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
NPIPB4C9JG80 RALGDS-203ENST00000372062 3596 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
NPIPB4C9JG80 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
NPIPB4C9JG80 CHI3L2-201ENST00000369744 1489 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
NPIPB4C9JG80 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
NPIPB4C9JG80 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
NPIPB4C9JG80 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
NPIPB4C9JG80 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
NPIPB4C9JG80 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
NPIPB4C9JG80 CD36-207ENST00000432207 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
NPIPB4C9JG80 POM121L1P-202ENST00000605258 1835 ntBASIC11.63□□□□□ -0.55
NPIPB4C9JG80 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC11.63□□□□□ -0.55
NPIPB4C9JG80 ILDR1-201ENST00000273691 2659 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
NPIPB4C9JG80 TARS2-214ENST00000606933 2162 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
NPIPB4C9JG80 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
NPIPB4C9JG80 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
NPIPB4C9JG80 SLC25A3-202ENST00000228318 1678 ntAPPRIS P4 TSL 5 BASIC11.62□□□□□ -0.55
NPIPB4C9JG80 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
NPIPB4C9JG80 WDR92-201ENST00000295121 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
NPIPB4C9JG80 UGT1A1-201ENST00000305208 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
NPIPB4C9JG80 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
NPIPB4C9JG80 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
NPIPB4C9JG80 SPTLC1-201ENST00000262554 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
NPIPB4C9JG80 LDB3-203ENST00000372056 1868 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
NPIPB4C9JG80 FAM214B-204ENST00000378566 2566 ntTSL 2 BASIC11.62□□□□□ -0.55
NPIPB4C9JG80 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
NPIPB4C9JG80 EPHA1-201ENST00000275815 3363 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
NPIPB4C9JG80 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC11.62□□□□□ -0.55
NPIPB4C9JG80 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
NPIPB4C9JG80 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
NPIPB4C9JG80 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC11.62□□□□□ -0.55
NPIPB4C9JG80 HNRNPA1P8-201ENST00000436090 951 ntBASIC11.62□□□□□ -0.55
NPIPB4C9JG80 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC11.62□□□□□ -0.55
NPIPB4C9JG80 LDHBP1-201ENST00000455730 1119 ntBASIC11.62□□□□□ -0.55
NPIPB4C9JG80 OR4A49P-201ENST00000527050 632 ntBASIC11.62□□□□□ -0.55
NPIPB4C9JG80 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC11.62□□□□□ -0.55
NPIPB4C9JG80 GOLGA2P10-201ENST00000550961 817 ntBASIC11.62□□□□□ -0.55
NPIPB4C9JG80 AC034102.3-201ENST00000551846 300 ntTSL 3 BASIC11.62□□□□□ -0.55
NPIPB4C9JG80 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC11.62□□□□□ -0.55
NPIPB4C9JG80 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC11.62□□□□□ -0.55
NPIPB4C9JG80 AC010326.4-202ENST00000603829 541 ntBASIC11.62□□□□□ -0.55
NPIPB4C9JG80 AC010326.4-201ENST00000604665 891 ntBASIC11.62□□□□□ -0.55
NPIPB4C9JG80 AC244097.1-201ENST00000621631 1216 ntBASIC11.62□□□□□ -0.55
NPIPB4C9JG80 GTF3A-209ENST00000640289 1098 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
NPIPB4C9JG80 AC068587.10-201ENST00000641210 219 ntBASIC11.62□□□□□ -0.55
NPIPB4C9JG80 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC11.62□□□□□ -0.55
NPIPB4C9JG80 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
NPIPB4C9JG80 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
NPIPB4C9JG80 MEG3-214ENST00000519709 1726 ntTSL 5 BASIC11.62□□□□□ -0.55
NPIPB4C9JG80 OR2A25-203ENST00000641663 1741 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
NPIPB4C9JG80 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
NPIPB4C9JG80 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC11.62□□□□□ -0.55
NPIPB4C9JG80 HPSE2-201ENST00000370546 1849 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
NPIPB4C9JG80 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
NPIPB4C9JG80 JAML-202ENST00000356289 1944 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
NPIPB4C9JG80 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
NPIPB4C9JG80 LINC01658-201ENST00000320372 1578 ntTSL 2 BASIC11.62□□□□□ -0.55
NPIPB4C9JG80 DZANK1-201ENST00000262547 3498 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
NPIPB4C9JG80 TRIM39-RPP21-201ENST00000623385 1698 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
NPIPB4C9JG80 LGR5-202ENST00000536515 2664 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
NPIPB4C9JG80 SPAG8-201ENST00000340291 1759 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
NPIPB4C9JG80 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
NPIPB4C9JG80 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
NPIPB4C9JG80 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
NPIPB4C9JG80 CDK5RAP1-201ENST00000339269 1891 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
NPIPB4C9JG80 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
NPIPB4C9JG80 PLOD2-201ENST00000282903 3732 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
NPIPB4C9JG80 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
NPIPB4C9JG80 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
NPIPB4C9JG80 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
NPIPB4C9JG80 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
NPIPB4C9JG80 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC11.61□□□□□ -0.55
NPIPB4C9JG80 MICAL1-208ENST00000630715 3678 ntTSL 2 BASIC11.61□□□□□ -0.55
NPIPB4C9JG80 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
NPIPB4C9JG80 MKL1-213ENST00000620651 3757 ntTSL 5 BASIC11.61□□□□□ -0.55
NPIPB4C9JG80 AC067852.6-201ENST00000591237 1736 ntBASIC11.61□□□□□ -0.55
NPIPB4C9JG80 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
NPIPB4C9JG80 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
NPIPB4C9JG80 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms