Protein–RNA interactions for Protein: Q9BZL3

SMIM3, Small integral membrane protein 3, humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3Q9BZL3 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC10.82□□□□□ -0.68
SMIM3Q9BZL3 CDH5-208ENST00000614547 3779 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SMIM3Q9BZL3 AC137834.1-201ENST00000548184 2107 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
SMIM3Q9BZL3 RNF130-207ENST00000522208 9945 ntTSL 5 BASIC10.82□□□□□ -0.68
SMIM3Q9BZL3 ITGB1BP1-201ENST00000238091 1772 ntTSL 3 BASIC10.82□□□□□ -0.68
SMIM3Q9BZL3 IP6K2-201ENST00000328631 1775 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SMIM3Q9BZL3 MYT1-203ENST00000536311 5614 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
SMIM3Q9BZL3 TTYH2-201ENST00000269346 3490 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SMIM3Q9BZL3 NRP1-201ENST00000265371 5882 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
SMIM3Q9BZL3 CABIN1-204ENST00000405822 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
SMIM3Q9BZL3 NUMA1-202ENST00000358965 7227 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
SMIM3Q9BZL3 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC10.82□□□□□ -0.68
SMIM3Q9BZL3 AHCYP2-201ENST00000430630 1300 ntBASIC10.82□□□□□ -0.68
SMIM3Q9BZL3 VPS33B-201ENST00000333371 2767 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SMIM3Q9BZL3 C17orf80-201ENST00000255557 2163 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
SMIM3Q9BZL3 SPTBN5-201ENST00000320955 11725 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SMIM3Q9BZL3 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
SMIM3Q9BZL3 ACSS3-203ENST00000548058 9254 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 UCK1-202ENST00000372210 2051 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 DPF2-202ENST00000415073 2085 ntTSL 2 BASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 SEPT8-210ENST00000448933 4270 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 MCCC2-201ENST00000340941 3665 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 MIR124-2HG-203ENST00000521441 2840 ntTSL 2 BASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 SLC8A3-207ENST00000528359 2840 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 SLC8A3-210ENST00000534137 2837 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 PES1P2-201ENST00000449745 1735 ntBASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 ALDH3A2-219ENST00000579855 3583 ntAPPRIS P3 TSL 5 BASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 STPG4-201ENST00000294947 1621 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 RBAK-201ENST00000353796 4125 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 BAG6-235ENST00000362049 3626 ntTSL 2 BASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 LINC00303-201ENST00000367207 1891 ntTSL 2 BASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 XIRP1-202ENST00000396251 6040 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 PRPS2-202ENST00000380668 2511 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 SPDYE8P-201ENST00000333385 2281 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 SPDYE11-201ENST00000340073 2281 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 SPDYE9P-203ENST00000575125 2281 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 LILRB4-205ENST00000430952 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 GIMAP6-201ENST00000328902 3440 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 DRC7-203ENST00000394337 2906 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 DPP3-215ENST00000541961 2676 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 BAX-205ENST00000391871 687 ntTSL 5 BASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 BX679664.3-201ENST00000414070 555 ntBASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 CNN2P8-201ENST00000421872 913 ntBASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 AL359979.2-201ENST00000435108 613 ntTSL 3 BASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 AC113935.1-201ENST00000471722 555 ntBASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 PFN2-215ENST00000497148 743 ntTSL 4 BASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 NFXL1-206ENST00000507489 3833 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 KRT90P-201ENST00000549264 1064 ntBASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 RPL28-206ENST00000558752 671 ntTSL 3 BASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 DUT-210ENST00000559935 569 ntTSL 3 BASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 NAA38-204ENST00000575208 529 ntTSL 3 BASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 AC140912.1-201ENST00000577171 1054 ntBASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 AC005498.2-205ENST00000593218 784 ntBASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 AC092171.5-201ENST00000608012 942 ntBASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 LAMA4-201ENST00000230538 6547 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 TSFM-204ENST00000454289 2192 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 MVK-213ENST00000625889 2591 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 JCAD-201ENST00000375377 9265 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 AC009133.3-201ENST00000565600 1656 ntTSL 5 BASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 HIVEP1-201ENST00000379388 9027 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 HIVEP1-208ENST00000541134 9023 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 SLC22A12-204ENST00000377574 3206 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 MROH7-204ENST00000409996 2977 ntTSL 5 BASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 PDE4DIP-237ENST00000585156 8439 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 AC053503.6-201ENST00000623864 1843 ntBASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 USP20-203ENST00000372429 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 CTBP2-201ENST00000309035 3669 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 PPARA-202ENST00000402126 1558 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 CELSR2-201ENST00000271332 10534 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 PHC2-203ENST00000373422 2799 ntTSL 2 BASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 BTBD9-201ENST00000314100 8486 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 VGLL4-201ENST00000273038 3725 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 IQCK-202ENST00000320394 3482 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 RAET1K-202ENST00000533735 1883 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 DIAPH3-205ENST00000400324 4804 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SMIM3Q9BZL3 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms