Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LMO3Q8TAP4 SLC47A1-201ENST00000270570 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LMO3Q8TAP4 C1RL-201ENST00000266542 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LMO3Q8TAP4 VAV1-202ENST00000539284 2627 ntTSL 5 BASIC14.04□□□□□ -0.16
LMO3Q8TAP4 INTS14-203ENST00000431261 1980 ntTSL 2 BASIC14.04□□□□□ -0.16
LMO3Q8TAP4 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LMO3Q8TAP4 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
LMO3Q8TAP4 RXRG-201ENST00000359842 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LMO3Q8TAP4 MICAL1-208ENST00000630715 3678 ntTSL 2 BASIC14.04□□□□□ -0.16
LMO3Q8TAP4 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LMO3Q8TAP4 SIRPB3P-201ENST00000340424 1216 ntBASIC14.04□□□□□ -0.16
LMO3Q8TAP4 RIBC1-203ENST00000414955 1281 ntTSL 2 BASIC14.04□□□□□ -0.16
LMO3Q8TAP4 AC004522.1-201ENST00000419978 654 ntBASIC14.04□□□□□ -0.16
LMO3Q8TAP4 AC093495.1-201ENST00000420253 1067 ntTSL 4 BASIC14.04□□□□□ -0.16
LMO3Q8TAP4 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC14.04□□□□□ -0.16
LMO3Q8TAP4 UBTFL5-201ENST00000443682 1191 ntBASIC14.04□□□□□ -0.16
LMO3Q8TAP4 RPSAP69-201ENST00000445739 546 ntTSL 4 BASIC14.04□□□□□ -0.16
LMO3Q8TAP4 AL136084.1-201ENST00000449172 318 ntBASIC14.04□□□□□ -0.16
LMO3Q8TAP4 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC14.04□□□□□ -0.16
LMO3Q8TAP4 AC078814.4-201ENST00000546650 327 ntBASIC14.04□□□□□ -0.16
LMO3Q8TAP4 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
LMO3Q8TAP4 RN7SL190P-201ENST00000582519 257 ntBASIC14.04□□□□□ -0.16
LMO3Q8TAP4 AL160191.2-201ENST00000603975 601 ntBASIC14.04□□□□□ -0.16
LMO3Q8TAP4 AL162731.1-201ENST00000613248 876 ntTSL 3 BASIC14.04□□□□□ -0.16
LMO3Q8TAP4 TNFRSF10A-204ENST00000613472 978 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LMO3Q8TAP4 AP000769.1-203ENST00000637245 208 ntBASIC14.04□□□□□ -0.16
LMO3Q8TAP4 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LMO3Q8TAP4 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC14.04□□□□□ -0.16
LMO3Q8TAP4 HMBOX1-203ENST00000397358 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LMO3Q8TAP4 AC090403.1-201ENST00000584546 1352 ntTSL 2 BASIC14.04□□□□□ -0.16
LMO3Q8TAP4 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC14.04□□□□□ -0.16
LMO3Q8TAP4 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
LMO3Q8TAP4 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LMO3Q8TAP4 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
LMO3Q8TAP4 GGTA1P-205ENST00000495328 3478 ntTSL 2 BASIC14.04□□□□□ -0.16
LMO3Q8TAP4 ZNF667-201ENST00000292069 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LMO3Q8TAP4 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LMO3Q8TAP4 ZNF582-201ENST00000301310 2824 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LMO3Q8TAP4 CA2-201ENST00000285379 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LMO3Q8TAP4 TMEM74B-201ENST00000381894 1730 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LMO3Q8TAP4 DYNC1I1-205ENST00000447467 2947 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LMO3Q8TAP4 ABCC4-207ENST00000629385 2903 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LMO3Q8TAP4 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LMO3Q8TAP4 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LMO3Q8TAP4 TMEM101-205ENST00000589334 1830 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
LMO3Q8TAP4 ALOX5-208ENST00000612635 1945 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LMO3Q8TAP4 FAM156A-223ENST00000623782 1931 ntAPPRIS P2 TSL 3 BASIC14.03□□□□□ -0.16
LMO3Q8TAP4 AL357509.1-201ENST00000641892 2013 ntBASIC14.03□□□□□ -0.16
LMO3Q8TAP4 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC14.03□□□□□ -0.16
LMO3Q8TAP4 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC14.03□□□□□ -0.16
LMO3Q8TAP4 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
LMO3Q8TAP4 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
LMO3Q8TAP4 PCDHB6-201ENST00000231136 3266 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
LMO3Q8TAP4 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LMO3Q8TAP4 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
LMO3Q8TAP4 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LMO3Q8TAP4 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
LMO3Q8TAP4 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LMO3Q8TAP4 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC14.03□□□□□ -0.16
LMO3Q8TAP4 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC14.03□□□□□ -0.16
LMO3Q8TAP4 GAPDHP29-201ENST00000429913 985 ntBASIC14.03□□□□□ -0.16
LMO3Q8TAP4 HNRNPA3P12-201ENST00000437410 1063 ntBASIC14.03□□□□□ -0.16
LMO3Q8TAP4 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC14.03□□□□□ -0.16
LMO3Q8TAP4 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC14.03□□□□□ -0.16
LMO3Q8TAP4 AC092862.1-201ENST00000541534 533 ntBASIC14.03□□□□□ -0.16
LMO3Q8TAP4 AC244097.1-201ENST00000621631 1216 ntBASIC14.03□□□□□ -0.16
LMO3Q8TAP4 OSBPL2-203ENST00000439951 3886 ntTSL 5 BASIC14.03□□□□□ -0.16
LMO3Q8TAP4 TXNRD1-214ENST00000526691 3974 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LMO3Q8TAP4 BPIFB6-201ENST00000349552 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LMO3Q8TAP4 AL109809.1-201ENST00000418979 1367 ntBASIC14.03□□□□□ -0.16
LMO3Q8TAP4 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC14.03□□□□□ -0.16
LMO3Q8TAP4 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LMO3Q8TAP4 DAND5-201ENST00000317060 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LMO3Q8TAP4 ATF4P4-201ENST00000393544 1930 ntBASIC14.03□□□□□ -0.16
LMO3Q8TAP4 CDC25C-202ENST00000348983 1951 ntTSL 5 BASIC14.03□□□□□ -0.16
LMO3Q8TAP4 TRIM40-206ENST00000376724 2006 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
LMO3Q8TAP4 ATAT1-202ENST00000319027 2061 ntTSL 2 BASIC14.03□□□□□ -0.16
LMO3Q8TAP4 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC14.03□□□□□ -0.16
LMO3Q8TAP4 BOLL-201ENST00000282278 2742 ntTSL 2 BASIC14.03□□□□□ -0.16
LMO3Q8TAP4 RNF220-202ENST00000355387 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LMO3Q8TAP4 AL031595.1-201ENST00000623969 4709 ntBASIC14.03□□□□□ -0.16
LMO3Q8TAP4 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC14.02□□□□□ -0.16
LMO3Q8TAP4 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LMO3Q8TAP4 SLC20A2-201ENST00000342228 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LMO3Q8TAP4 ELOVL6-201ENST00000302274 3090 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
LMO3Q8TAP4 ASB2-203ENST00000555019 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LMO3Q8TAP4 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
LMO3Q8TAP4 SPDYE8P-201ENST00000333385 2281 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LMO3Q8TAP4 SPDYE11-201ENST00000340073 2281 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LMO3Q8TAP4 SPDYE9P-203ENST00000575125 2281 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LMO3Q8TAP4 LINC02125-201ENST00000512279 2198 ntTSL 2 BASIC14.02□□□□□ -0.16
LMO3Q8TAP4 PAK3-211ENST00000518291 2098 ntTSL 5 BASIC14.02□□□□□ -0.16
LMO3Q8TAP4 TBC1D3B-202ENST00000611257 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LMO3Q8TAP4 LINC02140-202ENST00000566649 2017 ntTSL 2 BASIC14.02□□□□□ -0.16
LMO3Q8TAP4 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
LMO3Q8TAP4 MAGEB1-201ENST00000378981 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LMO3Q8TAP4 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LMO3Q8TAP4 TRIML2-207ENST00000512729 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LMO3Q8TAP4 ENO2-209ENST00000538763 1646 ntTSL 5 BASIC14.02□□□□□ -0.16
LMO3Q8TAP4 TTI2-204ENST00000520636 1588 ntTSL 5 BASIC14.02□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms