Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDE6BP35913 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDE6BP35913 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDE6BP35913 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PDE6BP35913 STK3-218ENST00000617590 2485 ntTSL 5 BASIC16.06■□□□□ 0.16
PDE6BP35913 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDE6BP35913 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PDE6BP35913 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PDE6BP35913 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PDE6BP35913 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDE6BP35913 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDE6BP35913 TRMT61B-201ENST00000306108 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDE6BP35913 LINC02381-202ENST00000635070 1341 ntTSL 5 BASIC16.06■□□□□ 0.16
PDE6BP35913 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PDE6BP35913 FCER1A-201ENST00000368114 765 ntTSL 3 BASIC16.06■□□□□ 0.16
PDE6BP35913 LCE2D-201ENST00000368784 609 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDE6BP35913 SRSF9P1-201ENST00000399149 530 ntBASIC16.06■□□□□ 0.16
PDE6BP35913 HNRNPA1P19-201ENST00000405292 370 ntBASIC16.06■□□□□ 0.16
PDE6BP35913 CNTFR-AS1-201ENST00000436360 892 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PDE6BP35913 CYP4F60P-201ENST00000439449 549 ntBASIC16.06■□□□□ 0.16
PDE6BP35913 TMEM91-206ENST00000447302 721 ntTSL 2 BASIC16.06■□□□□ 0.16
PDE6BP35913 CNTFR-AS1-203ENST00000453642 723 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PDE6BP35913 NDFIP2-AS1-201ENST00000457171 431 ntTSL 3 BASIC16.06■□□□□ 0.16
PDE6BP35913 OR2A1-AS1-203ENST00000468575 568 ntBASIC16.06■□□□□ 0.16
PDE6BP35913 CDK2AP2P2-201ENST00000478512 367 ntBASIC16.06■□□□□ 0.16
PDE6BP35913 AC025178.1-201ENST00000503441 834 ntTSL 2 BASIC16.06■□□□□ 0.16
PDE6BP35913 AC097658.2-201ENST00000512715 624 ntTSL 3 BASIC16.06■□□□□ 0.16
PDE6BP35913 LINC01606-208ENST00000521653 557 ntTSL 4 BASIC16.06■□□□□ 0.16
PDE6BP35913 CDK2AP1-204ENST00000538446 1161 ntTSL 5 BASIC16.06■□□□□ 0.16
PDE6BP35913 AP000753.1-201ENST00000542805 573 ntTSL 4 BASIC16.06■□□□□ 0.16
PDE6BP35913 ORMDL2-204ENST00000550836 438 ntTSL 3 BASIC16.06■□□□□ 0.16
PDE6BP35913 HERC2P5-202ENST00000564458 1164 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PDE6BP35913 HERC2P8-203ENST00000564795 1164 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PDE6BP35913 LINC00662-204ENST00000588027 562 ntTSL 5 BASIC16.06■□□□□ 0.16
PDE6BP35913 AC015936.1-201ENST00000591013 1028 ntBASIC16.06■□□□□ 0.16
PDE6BP35913 AC104423.1-201ENST00000591742 728 ntTSL 3 BASIC16.06■□□□□ 0.16
PDE6BP35913 AC013472.3-201ENST00000607407 659 ntBASIC16.06■□□□□ 0.16
PDE6BP35913 MIR7704-201ENST00000610524 59 ntBASIC16.06■□□□□ 0.16
PDE6BP35913 LINC00869-208ENST00000621156 737 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PDE6BP35913 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDE6BP35913 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PDE6BP35913 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PDE6BP35913 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PDE6BP35913 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDE6BP35913 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDE6BP35913 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
PDE6BP35913 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDE6BP35913 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
PDE6BP35913 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDE6BP35913 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDE6BP35913 ALDH3B2-204ENST00000530069 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDE6BP35913 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PDE6BP35913 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDE6BP35913 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
PDE6BP35913 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDE6BP35913 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDE6BP35913 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDE6BP35913 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
PDE6BP35913 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDE6BP35913 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PDE6BP35913 LINGO1-AS1-201ENST00000558691 1720 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PDE6BP35913 COL6A4P2-202ENST00000504443 2753 ntBASIC16.05■□□□□ 0.16
PDE6BP35913 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDE6BP35913 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDE6BP35913 GSDMB-201ENST00000309481 1500 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
PDE6BP35913 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
PDE6BP35913 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
PDE6BP35913 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDE6BP35913 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDE6BP35913 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDE6BP35913 CABYR-203ENST00000399496 1414 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDE6BP35913 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDE6BP35913 CDC42-202ENST00000344548 2256 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDE6BP35913 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
PDE6BP35913 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC16.05■□□□□ 0.16
PDE6BP35913 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDE6BP35913 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PDE6BP35913 SNAPC5-203ENST00000395589 749 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
PDE6BP35913 AL391647.1-201ENST00000395664 511 ntBASIC16.05■□□□□ 0.16
PDE6BP35913 OR2A14-201ENST00000408899 1012 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
PDE6BP35913 FAM45BP-201ENST00000408950 1074 ntBASIC16.05■□□□□ 0.16
PDE6BP35913 AC006059.1-201ENST00000438017 722 ntTSL 5 BASIC16.05■□□□□ 0.16
PDE6BP35913 AQP7-207ENST00000447660 998 ntTSL 2 BASIC16.05■□□□□ 0.16
PDE6BP35913 SPTY2D1-AS1-202ENST00000511927 573 ntAPPRIS ALT2 TSL 4 BASIC16.05■□□□□ 0.16
PDE6BP35913 KCNE3-202ENST00000525550 935 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDE6BP35913 OR7E14P-201ENST00000526721 1000 ntBASIC16.05■□□□□ 0.16
PDE6BP35913 AP003062.1-201ENST00000528497 762 ntTSL 3 BASIC16.05■□□□□ 0.16
PDE6BP35913 AC073610.2-201ENST00000537495 406 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
PDE6BP35913 SNAPC5-205ENST00000563480 920 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
PDE6BP35913 AC010615.2-201ENST00000596705 566 ntTSL 4 BASIC16.05■□□□□ 0.16
PDE6BP35913 FAM231B-201ENST00000600179 510 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
PDE6BP35913 AC025165.4-201ENST00000602327 433 ntBASIC16.05■□□□□ 0.16
PDE6BP35913 FXYD3-207ENST00000604255 780 ntTSL 5 BASIC16.05■□□□□ 0.16
PDE6BP35913 PSMG3-AS1-207ENST00000612019 586 ntTSL 4 BASIC16.05■□□□□ 0.16
PDE6BP35913 C12orf45-205ENST00000622317 1078 ntTSL 5 BASIC16.05■□□□□ 0.16
PDE6BP35913 MGST3-214ENST00000627653 1130 ntTSL 5 BASIC16.05■□□□□ 0.16
PDE6BP35913 AL592295.4-201ENST00000636161 997 ntTSL 4 BASIC16.05■□□□□ 0.16
PDE6BP35913 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDE6BP35913 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDE6BP35913 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms