Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 AC004448.1-201ENST00000458332 883 ntBASIC26.32■■□□□ 1.8
DDX49Q9Y6V7 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC26.32■■□□□ 1.8
DDX49Q9Y6V7 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC26.32■■□□□ 1.8
DDX49Q9Y6V7 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
DDX49Q9Y6V7 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
DDX49Q9Y6V7 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
DDX49Q9Y6V7 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
DDX49Q9Y6V7 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
DDX49Q9Y6V7 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC26.31■■□□□ 1.8
DDX49Q9Y6V7 AC131274.2-201ENST00000580697 1507 ntBASIC26.31■■□□□ 1.8
DDX49Q9Y6V7 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
DDX49Q9Y6V7 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
DDX49Q9Y6V7 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
DDX49Q9Y6V7 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
DDX49Q9Y6V7 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC26.3■■□□□ 1.8
DDX49Q9Y6V7 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
DDX49Q9Y6V7 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC26.3■■□□□ 1.8
DDX49Q9Y6V7 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
DDX49Q9Y6V7 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
DDX49Q9Y6V7 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
DDX49Q9Y6V7 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC26.3■■□□□ 1.8
DDX49Q9Y6V7 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
DDX49Q9Y6V7 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC26.3■■□□□ 1.8
DDX49Q9Y6V7 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
DDX49Q9Y6V7 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
DDX49Q9Y6V7 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC26.29■■□□□ 1.8
DDX49Q9Y6V7 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
DDX49Q9Y6V7 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
DDX49Q9Y6V7 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
DDX49Q9Y6V7 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC26.29■■□□□ 1.8
DDX49Q9Y6V7 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC26.29■■□□□ 1.8
DDX49Q9Y6V7 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
DDX49Q9Y6V7 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
DDX49Q9Y6V7 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
DDX49Q9Y6V7 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
DDX49Q9Y6V7 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
DDX49Q9Y6V7 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
DDX49Q9Y6V7 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
DDX49Q9Y6V7 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC26.28■■□□□ 1.8
DDX49Q9Y6V7 PBX2P1-201ENST00000493219 1291 ntBASIC26.28■■□□□ 1.8
DDX49Q9Y6V7 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC26.28■■□□□ 1.8
DDX49Q9Y6V7 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
DDX49Q9Y6V7 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
DDX49Q9Y6V7 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
DDX49Q9Y6V7 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
DDX49Q9Y6V7 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
DDX49Q9Y6V7 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
DDX49Q9Y6V7 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
DDX49Q9Y6V7 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC26.27■■□□□ 1.8
DDX49Q9Y6V7 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
DDX49Q9Y6V7 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
DDX49Q9Y6V7 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
DDX49Q9Y6V7 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
DDX49Q9Y6V7 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
DDX49Q9Y6V7 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
DDX49Q9Y6V7 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
DDX49Q9Y6V7 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
DDX49Q9Y6V7 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
DDX49Q9Y6V7 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
DDX49Q9Y6V7 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
DDX49Q9Y6V7 UNC93B3-201ENST00000308076 687 ntBASIC26.26■■□□□ 1.79
DDX49Q9Y6V7 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC26.26■■□□□ 1.79
DDX49Q9Y6V7 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC26.26■■□□□ 1.79
DDX49Q9Y6V7 AL024507.2-201ENST00000606070 2574 ntBASIC26.26■■□□□ 1.79
DDX49Q9Y6V7 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
DDX49Q9Y6V7 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
DDX49Q9Y6V7 COMT-203ENST00000403184 2217 ntTSL 2 BASIC26.25■■□□□ 1.79
DDX49Q9Y6V7 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC26.25■■□□□ 1.79
DDX49Q9Y6V7 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC26.25■■□□□ 1.79
DDX49Q9Y6V7 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC26.25■■□□□ 1.79
DDX49Q9Y6V7 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
DDX49Q9Y6V7 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
DDX49Q9Y6V7 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
DDX49Q9Y6V7 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
DDX49Q9Y6V7 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC26.25■■□□□ 1.79
DDX49Q9Y6V7 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
DDX49Q9Y6V7 H19-210ENST00000439725 1929 ntTSL 2 BASIC26.24■■□□□ 1.79
DDX49Q9Y6V7 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
DDX49Q9Y6V7 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
DDX49Q9Y6V7 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
DDX49Q9Y6V7 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
DDX49Q9Y6V7 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
DDX49Q9Y6V7 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
DDX49Q9Y6V7 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
DDX49Q9Y6V7 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC26.23■■□□□ 1.79
DDX49Q9Y6V7 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
DDX49Q9Y6V7 AC106739.1-201ENST00000617035 715 ntBASIC26.23■■□□□ 1.79
DDX49Q9Y6V7 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
DDX49Q9Y6V7 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC26.23■■□□□ 1.79
DDX49Q9Y6V7 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
DDX49Q9Y6V7 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC26.22■■□□□ 1.79
DDX49Q9Y6V7 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
DDX49Q9Y6V7 ZNRF2P3-201ENST00000424200 374 ntBASIC26.22■■□□□ 1.79
DDX49Q9Y6V7 AL031432.3-201ENST00000607698 485 ntBASIC26.22■■□□□ 1.79
DDX49Q9Y6V7 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
DDX49Q9Y6V7 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
DDX49Q9Y6V7 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
DDX49Q9Y6V7 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC26.22■■□□□ 1.79
DDX49Q9Y6V7 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
DDX49Q9Y6V7 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms