Protein–RNA interactions for Protein: Q9Y5H5

PCDHA9, Protocadherin alpha-9, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9Q9Y5H5 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
PCDHA9Q9Y5H5 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHA9Q9Y5H5 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.24■□□□□ 0.99
PCDHA9Q9Y5H5 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.24■□□□□ 0.99
PCDHA9Q9Y5H5 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
PCDHA9Q9Y5H5 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.24■□□□□ 0.99
PCDHA9Q9Y5H5 MIR6724-1-201ENST00000616420 92 ntBASIC21.24■□□□□ 0.99
PCDHA9Q9Y5H5 MIR6724-2-201ENST00000616483 92 ntBASIC21.24■□□□□ 0.99
PCDHA9Q9Y5H5 MIR6724-4-201ENST00000617390 92 ntBASIC21.24■□□□□ 0.99
PCDHA9Q9Y5H5 MIR6724-3-201ENST00000622482 92 ntBASIC21.24■□□□□ 0.99
PCDHA9Q9Y5H5 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.24■□□□□ 0.99
PCDHA9Q9Y5H5 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
PCDHA9Q9Y5H5 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHA9Q9Y5H5 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.24■□□□□ 0.99
PCDHA9Q9Y5H5 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHA9Q9Y5H5 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
PCDHA9Q9Y5H5 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
PCDHA9Q9Y5H5 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHA9Q9Y5H5 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHA9Q9Y5H5 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHA9Q9Y5H5 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.23■□□□□ 0.99
PCDHA9Q9Y5H5 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHA9Q9Y5H5 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHA9Q9Y5H5 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHA9Q9Y5H5 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
PCDHA9Q9Y5H5 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.23■□□□□ 0.99
PCDHA9Q9Y5H5 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHA9Q9Y5H5 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
PCDHA9Q9Y5H5 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHA9Q9Y5H5 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHA9Q9Y5H5 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHA9Q9Y5H5 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHA9Q9Y5H5 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
PCDHA9Q9Y5H5 KRT16P3-201ENST00000439127 1283 ntBASIC21.22■□□□□ 0.99
PCDHA9Q9Y5H5 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.22■□□□□ 0.99
PCDHA9Q9Y5H5 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.22■□□□□ 0.99
PCDHA9Q9Y5H5 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.22■□□□□ 0.99
PCDHA9Q9Y5H5 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
PCDHA9Q9Y5H5 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.22■□□□□ 0.99
PCDHA9Q9Y5H5 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHA9Q9Y5H5 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHA9Q9Y5H5 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.21■□□□□ 0.99
PCDHA9Q9Y5H5 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.21■□□□□ 0.99
PCDHA9Q9Y5H5 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHA9Q9Y5H5 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
PCDHA9Q9Y5H5 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHA9Q9Y5H5 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
PCDHA9Q9Y5H5 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
PCDHA9Q9Y5H5 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHA9Q9Y5H5 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHA9Q9Y5H5 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHA9Q9Y5H5 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.2■□□□□ 0.98
PCDHA9Q9Y5H5 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHA9Q9Y5H5 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
PCDHA9Q9Y5H5 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHA9Q9Y5H5 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHA9Q9Y5H5 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHA9Q9Y5H5 AC092053.2-201ENST00000640557 1818 ntBASIC21.2■□□□□ 0.98
PCDHA9Q9Y5H5 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.2■□□□□ 0.98
PCDHA9Q9Y5H5 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHA9Q9Y5H5 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHA9Q9Y5H5 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
PCDHA9Q9Y5H5 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHA9Q9Y5H5 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHA9Q9Y5H5 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHA9Q9Y5H5 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHA9Q9Y5H5 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.19■□□□□ 0.98
PCDHA9Q9Y5H5 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
PCDHA9Q9Y5H5 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHA9Q9Y5H5 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHA9Q9Y5H5 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHA9Q9Y5H5 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
PCDHA9Q9Y5H5 AC144652.1-201ENST00000609974 1624 ntBASIC21.18■□□□□ 0.98
PCDHA9Q9Y5H5 C11orf96-202ENST00000528572 1834 ntBASIC21.18■□□□□ 0.98
PCDHA9Q9Y5H5 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHA9Q9Y5H5 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHA9Q9Y5H5 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.18■□□□□ 0.98
PCDHA9Q9Y5H5 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHA9Q9Y5H5 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.18■□□□□ 0.98
PCDHA9Q9Y5H5 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.18■□□□□ 0.98
PCDHA9Q9Y5H5 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHA9Q9Y5H5 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHA9Q9Y5H5 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
PCDHA9Q9Y5H5 AL353803.4-201ENST00000565882 1934 ntBASIC21.17■□□□□ 0.98
PCDHA9Q9Y5H5 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHA9Q9Y5H5 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.17■□□□□ 0.98
PCDHA9Q9Y5H5 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHA9Q9Y5H5 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHA9Q9Y5H5 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.17■□□□□ 0.98
PCDHA9Q9Y5H5 AC009102.2-201ENST00000606772 1639 ntBASIC21.17■□□□□ 0.98
PCDHA9Q9Y5H5 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHA9Q9Y5H5 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
PCDHA9Q9Y5H5 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHA9Q9Y5H5 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHA9Q9Y5H5 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHA9Q9Y5H5 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHA9Q9Y5H5 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHA9Q9Y5H5 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHA9Q9Y5H5 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.16■□□□□ 0.98
PCDHA9Q9Y5H5 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms